Jatropha Genome Database
- JcCB0101961.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0101961.10 - phase: 0 /partial
(1185 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29785.m000932 myb81, putative 236 2e-61
29686.m000890 r2r3-myb transcription factor, putative 62 8e-09
30190.m011268 r2r3-myb transcription factor, putative 60 3e-08
>29785.m000932 myb81, putative
Length = 1437
Score = 236 bits (119), Expect = 2e-61
Identities = 167/183 (91%)
Strand = Plus / Plus
Query: 533 ctggcattcatgccctattaaatgacaattcttcttcttctgagcccttttgtgggctta 592
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 842 ctggcagtcatgccctattaaatgacaattcttcttcttctgagcccttatgtggggcta 901
Query: 593 tgaagttagagctcccttcactccaatattcagaaactcaacaagacagttggggaatgc 652
||||||| |||||||||||||||||||||||||||||||||||||| || |||| || |
Sbjct: 902 tgaagttggagctcccttcactccaatattcagaaactcaacaagatagctgggaaagac 961
Query: 653 ctgcttctccattgccttcacttgagtctgttgatactttgattcagtctcctccaactg 712
| |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 962 ccacttccccactgccttcacttgagtctgttgataccttgattcagtctcctccaaccg 1021
Query: 713 agc 715
|||
Sbjct: 1022 agc 1024
Score = 198 bits (100), Expect = 5e-50
Identities = 214/252 (84%)
Strand = Plus / Plus
Query: 1 ttgcctggacgcacagataatgagataaaaaattactggaatacaagaataaagagactt 60
|||||||| |||||||||||||| || || |||||||||||||| |||||||||||| |
Sbjct: 343 ttgcctgggcgcacagataatgaaattaagaattactggaatacgagaataaagagatta 402
Query: 61 cagcgagctggtttaccaatttatcctcctgaagtgtgcctgcaagtattaaatggaagt 120
|| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 403 caacgtgctggtttaccaatttatcctcctgaagtgtgcctgcaactatttaatggaagc 462
Query: 121 caagaaagtcaggacatgggaacactgcaaagtacggatacacatggttctaatctcata 180
|| |||||||| || |||| |||| |||| ||| || |||||| | ||| |||| ||
Sbjct: 463 catgaaagtcaaaacttgggtacaccacaaactacagacacacatagctctgatctaatt 522
Query: 181 cagaatgaccattttgagattccagaagtggaattcaagaatttagaactcaaccgtgga 240
|||| || ||||| |||||||||||||||| ||||| ||||||| ||| ||| || ||
Sbjct: 523 cagactggccattatgagattccagaagtgcaattccagaatttcgaattcagtcggggt 582
Query: 241 cttctatcttat 252
||||||||||||
Sbjct: 583 cttctatcttat 594
>29686.m000890 r2r3-myb transcription factor, putative
Length = 1671
Score = 61.9 bits (31), Expect = 8e-09
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 1 ttgcctggacgcacagataatgagataaaaaattactggaatacaagaataaagagactt 60
|||||||| || ||||| ||||||||||| ||||||||||| || ||||| ||||| |
Sbjct: 364 ttgcctggtcgtacagacaatgagataaagaattactggaacaccagaattaagaggcgc 423
Query: 61 cagcgagctggtttaccaatttatcctcctgaagt 95
|| || ||||||||||| | |||||||| |||||
Sbjct: 424 caacgggctggtttacctctatatcctccagaagt 458
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 593 tgaagttagagctcccttcactccaatattcagaaact 630
||||||| ||||||||||||||||||||| ||||||||
Sbjct: 953 tgaagttggagctcccttcactccaatatccagaaact 990
>30190.m011268 r2r3-myb transcription factor, putative
Length = 999
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttgcctggacgcacagataatgagataaaaaattactggaat 42
||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 286 ttgcctggaagaacagataatgagataaagaattactggaat 327