Jatropha Genome Database

JcCB0101331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0101331.10 + phase: 0 
         (312 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29656.m000472 cell cycle checkpoint protein rad17, putative           161   3e-39

>29656.m000472 cell cycle checkpoint protein rad17, putative
          Length = 492

 Score =  161 bits (81), Expect = 3e-39
 Identities = 147/169 (86%)
 Strand = Plus / Plus

                                                                       
Query: 101 taaaagaattatggattgataaatacaagcctcgttctttggaggaacttgctgttcata 160
           |||| ||||| ||| |||||| ||||||||| ||||||||||| ||||||||||||||| 
Sbjct: 290 taaaggaattgtgggttgatatatacaagccccgttctttggaagaacttgctgttcatc 349

                                                                       
Query: 161 agaagaaggtcgaaggagttaaaatatggtttgaggaaagattgagagcttcaaaggaaa 220
           ||||||||||  ||| |||||| || ||||||||||||||||||| |||||||||||| |
Sbjct: 350 agaagaaggttaaagaagttaagatgtggtttgaggaaagattgaaagcttcaaaggaca 409

                                                            
Query: 221 aaattgaaaataatgttcttgtcatcactgggcaagctggtgttggaaa 269
           |  ||   ||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 410 agcttagcaattatgttcttgtcatcactggacaagctggcgttggaaa 458