Jatropha Genome Database
- JcCB0100701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0100701.10 - phase: 0
(723 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29776.m000489 UDP-glucose 4-epimerase, putative 712 0.0
29724.m000863 UDP-glucose 4-epimerase, putative 103 1e-21
>29776.m000489 UDP-glucose 4-epimerase, putative
Length = 1254
Score = 712 bits (359), Expect = 0.0
Identities = 571/644 (88%)
Strand = Plus / Plus
Query: 1 atgctaaatattggcaggaacagaaatcagccaaggaataacagatctatgccacttggg 60
||||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 1 atgctaaattttggcagggccagaaatcagcaaaggacaaacagatctatgccgcttgca 60
Query: 61 ggcttggattatgctgaccctaaaaggaagggtaatattgtagggaagannnnnnnggct 120
|||||||| || || ||||| ||||||||| ||||| |||| ||||||| ||||
Sbjct: 61 ggcttggactacgcagacccgaaaaggaagagtaatgttgtggggaagattattttggct 120
Query: 121 gctgccctcacagccttatgcattattatgctcaagcaatccccaacatttaacacccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 121 gctgccctcacagccttatgcattattatgctcaagcaatccccaacatttaatacccca 180
Query: 181 agtctgttctcggtgcatgaggaaggggtgactcatgtcctggtgactggtggtgctggc 240
|| | ||||| ||||||| || |||||| ||||||||| ||||||||||| ||||||
Sbjct: 181 agccctttctctctgcatgaagatggggtggttcatgtcctagtgactggtggagctggc 240
Query: 241 tacattggttcacatgctgcattgcgacttctgaaggatggttacagggtaaccatagtg 300
|||||||||||||||||| |||||||||||||||||||||| ||| | || |||||||||
Sbjct: 241 tacattggttcacatgcttcattgcgacttctgaaggatggataccgtgttaccatagtg 300
Query: 301 gataacctctcacggggaaacctaggtgctgtcaaggttttacaagaactattcccggaa 360
|||||||| ||||||||||||||||||||||| |||||| |||||||| |||| || |||
Sbjct: 301 gataacctttcacggggaaacctaggtgctgtaaaggttctacaagaattatttccagaa 360
Query: 361 cctgggaggcttcagttcatttatgctgacttaggagacgcaaaagctgttaacaaaata 420
|||||||||||||||||||| || |||||||| || | ||||| | ||||| ||||||
Sbjct: 361 cctgggaggcttcagttcatatacgctgacttgggcaattcaaaatccgttaataaaata 420
Query: 421 ttttcagaaaatgcatttgacgctgtgatgcactttgctgctgttgcatatgttggggaa 480
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttcagaaaacgcatttgatgctgtgatgcactttgctgctgttgcatatgttggggaa 480
Query: 481 agcaccatggatcctcttaagtactatcacaacattacatcaaatactttggtagtactg 540
||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||| ||
Sbjct: 481 agcactatggatcctcttaagtactatcacaacattacatcaaacaccttggtggtattg 540
Query: 541 gagtcaatggctgcacatgatgtaaagactttgatatattctagtacatgtgcaacgtat 600
||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||
Sbjct: 541 gagtcaatggctgcacatgatgttaagactttaatatattcaagcacatgtgcaacatac 600
Query: 601 ggggagcctgagaagatgcctattactgaagacactccacaggt 644
||||| |||||||||||||||||||||||||| ||| |||||||
Sbjct: 601 ggggaacctgagaagatgcctattactgaagatactgcacaggt 644
>29724.m000863 UDP-glucose 4-epimerase, putative
Length = 888
Score = 103 bits (52), Expect = 1e-21
Identities = 112/132 (84%)
Strand = Plus / Plus
Query: 506 atcacaacattacatcaaatactttggtagtactggagtcaatggctgcacatgatgtaa 565
||||||||||| ||||||||||||||||| | | ||| |||||||||||||| |||| |
Sbjct: 233 atcacaacatttcatcaaatactttggtacttttagaggcaatggctgcacatcatgtga 292
Query: 566 agactttgatatattctagtacatgtgcaacgtatggggagcctgagaagatgcctatta 625
|||| ||||| |||||||| || ||| |||| ||||| |||||||| || ||||| ||||
Sbjct: 293 agacattgatttattctagcacctgtacaacatatggagagcctgaaaaaatgccaatta 352
Query: 626 ctgaagacactc 637
| ||||| ||||
Sbjct: 353 cagaagaaactc 364
Score = 81.8 bits (41), Expect = 5e-15
Identities = 88/103 (85%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 383 atgctgacttaggagacgcaaaagctgttaacaaaatattttcagaaaatgcatttgacg 442
|||||||||||||||| ||||||| | |||||||| ||| | |||||||||||||| |
Sbjct: 95 atgctgacttaggagatgcaaaag---taaacaaaatctttgctgaaaatgcatttgatg 151
Query: 443 ctgtgatgcactttgctgctgttgcatatgttggggaaagcac 485
| || ||||| |||||||||||||| ||| |||| ||||||||
Sbjct: 152 cggtcatgcattttgctgctgttgcttatattggtgaaagcac 194