Jatropha Genome Database

JcCB0099801.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0099801.10 - phase: 0 
         (384 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002806 Late embryogenesis abundant protein D-7, putative        66   2e-10

>29841.m002806 Late embryogenesis abundant protein D-7, putative
          Length = 393

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                       
Query: 191 atgaagggaaggagaagacaaagggagttctggaagaaactggggagaaaatgaagcatg 250
           |||||||||| |||||||||||||||||  |  |  |||||||||| ||| ||||  |  
Sbjct: 218 atgaagggaaagagaagacaaagggagtggtccagcaaactggggacaaagtgaaaaaca 277

                                                            
Query: 251 cagctcaaaaaactgctgatactgtcaaaagcgcttttggtatggctca 299
             |||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 278 tggctcaaaaaactgctgatacagtgaagagtgcttttggtatggctca 326



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                        
Query: 30 cagagccggtgaggctacaggccgagccgaggagaaggggaacaga 75
          |||||| |||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 24 cagagctggtgaggccacaggccgagctgaggagaagggtaacaga 69