Jatropha Genome Database
- JcCB0099081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0099081.10 + phase: 0 /partial
(474 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004035 conserved hypothetical protein 502 e-141
29848.m004543 DNA binding protein, putative 74 8e-13
29827.m002589 conserved hypothetical protein 70 1e-11
29696.m000106 actin binding protein, putative 52 3e-06
>30138.m004035 conserved hypothetical protein
Length = 4653
Score = 502 bits (253), Expect = e-141
Identities = 379/421 (90%)
Strand = Plus / Plus
Query: 23 cgcttctagattttcacctggatcttgttagccttgaacctgcaactaagatacaattaa 82
|||||||| ||||||||||||| |||||||||| ||| ||||||| |||||||||||||
Sbjct: 4196 cgcttctaaattttcacctggactttgttagcctggaagctgcaaccaagatacaattaa 4255
Query: 83 agtctttagcagaagaaatgcaagctataatcaaggggctagaaaaggtgaaacaggagt 142
||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 4256 agtctttagcagaagaaatgcaagctataattaagggactggaaaaggtgaaacaggagc 4315
Query: 143 tggcggcatcagaaaaagatggtcctgtatctgaagttttccgaaagacattaaaagaat 202
|||||||||||||||| ||||||||||| |||| |||||| || ||||| || |||||||
Sbjct: 4316 tggcggcatcagaaaatgatggtcctgtctctggagtttttcgtaagacgttgaaagaat 4375
Query: 203 tcatttctgttgctgagacggaggtagcttctgtgacaaatctatactctgttgtgggta 262
| |||||||||||||||||||||| |||||||||||||| || | ||||||||||
Sbjct: 4376 ttgtttctgttgctgagacggaggtgaaatctgtgacaaatctttatgcagttgtgggta 4435
Query: 263 gaaatgcagatgcacttgcactatattttggtgaggatccagctcgttgcccatttgagc 322
||||||| |||||||| |||| |||||||||||||||||| || ||||| ||||||||||
Sbjct: 4436 gaaatgctgatgcactagcacaatattttggtgaggatcctgcacgttgtccatttgagc 4495
Query: 323 aagttactgcaaccctattaaattttgtgaggttgtttcggaaagcacatgaagagaatt 382
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 4496 aagttaccgcaaccctattaaattttgtgaggttgttccggaaagcacatgaagaaaatg 4555
Query: 383 taaaacaggctgaattagaaaagaagaaagctgagaaggaggctgaaatggagaaggcga 442
| || |||| |||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4556 tgaagcaggttgaaatggaaaagaagaaagctgagaaggaggctgaaatggagaaggcga 4615
Query: 443 a 443
|
Sbjct: 4616 a 4616
>29848.m004543 DNA binding protein, putative
Length = 3801
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 255 tgtgggtagaaatgcagatgcacttgcactatattttggtgaggatccagctcgttgccc 314
|||||| ||||||||||||||| | || || |||||||| || ||||| || ||||||||
Sbjct: 3543 tgtgggcagaaatgcagatgcattggccctttattttggagaagatcctgcacgttgccc 3602
Query: 315 atttgagcaagtt 327
|||||||||||||
Sbjct: 3603 atttgagcaagtt 3615
>29827.m002589 conserved hypothetical protein
Length = 375
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 256 gtgggtagaaatgcagatgcacttgcactatattttggtgaggatccagctcgttgccca 315
||||| |||||||||||| || | | | ||||||||| ||||||||||||||||||||
Sbjct: 106 gtgggaagaaatgcagattcattgtctcaatattttggagaggatccagctcgttgcccc 165
Query: 316 tttgagcaagt 326
|||||||||||
Sbjct: 166 tttgagcaagt 176
>29696.m000106 actin binding protein, putative
Length = 3576
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 70 aagatacaattaaagtctttagcagaagaaatgcaagctataatcaaggg 119
|||||||||||||| | ||| ||||| ||||||||||| |||| ||||||
Sbjct: 3145 aagatacaattaaaatttttggcagaggaaatgcaagccataagcaaggg 3194