Jatropha Genome Database

JcCB0097901.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0097901.30 + phase: 0 /partial
         (444 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002453 multidrug resistance pump, putative                     327   3e-89

>29851.m002453 multidrug resistance pump, putative
          Length = 1491

 Score =  327 bits (165), Expect = 3e-89
 Identities = 306/353 (86%)
 Strand = Plus / Plus

                                                                       
Query: 86  gctgggatgaatcaaagaagatgtgggaaattgcaacacctgctatgttaactgcagtaa 145
           |||||||||||||||||| ||||||||| || ||| | ||||||||| |||| |||||||
Sbjct: 98  gctgggatgaatcaaagaggatgtgggagatagcagctcctgctatgataacagcagtaa 157

                                                                       
Query: 146 cccaattttctattggagttgttacttctgcatttgttggccatataggagaggtagagt 205
           | ||||| ||||||||  |||| |||||||||| |||||||||| |||||||||| ||| 
Sbjct: 158 ctcaattctctattgggtttgtcacttctgcatatgttggccatttaggagaggtggagc 217

                                                                       
Query: 206 tggctgctgtttctattgttcagaatgtaattgaaggcttcgtctttggagtaatgctag 265
           | ||||||||||| |||||||||||||||||||||||||| || | ||| || ||| |||
Sbjct: 218 ttgctgctgtttcaattgttcagaatgtaattgaaggctttgtatatggggtcatgttag 277

                                                                       
Query: 266 gaatgggaagtgctctggagacactatgtggtcaagctgttggtgctggacaagtgaaca 325
           | ||||||||||| ||||| || |||||||||||||||||||||||||||||| | ||||
Sbjct: 278 ggatgggaagtgccctggaaacgctatgtggtcaagctgttggtgctggacaacttaaca 337

                                                                       
Query: 326 tgcttggaatctatttgcagagatcatggactattactggagtcacagctttatttttaa 385
           |||||||| ||||| |||| | ||||||||  |||||||| ||| ||||||| |||||| 
Sbjct: 338 tgcttggagtctatatgcaaaaatcatggatcattactggggtcgcagctttgtttttag 397

                                                                
Query: 386 cacctgtttatgttttcacatcgccattactgcaactccttcatcaagacaaa 438
           | ||| ||||| ||||| | ||||||||||| || ||||||||||||||||||
Sbjct: 398 cgcctttttatattttcgcttcgccattactacagctccttcatcaagacaaa 450