Jatropha Genome Database

JcCB0097811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0097811.10 + phase: 0 /partial
         (426 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011277 endo-1,4-beta-glucanase, putative                       159   2e-38

>30190.m011277 endo-1,4-beta-glucanase, putative
          Length = 1557

 Score =  159 bits (80), Expect = 2e-38
 Identities = 206/248 (83%)
 Strand = Plus / Plus

                                                                       
Query: 172 tggagagctgactctgctctttctgatggcaagcctgataatgtcaatttaacaggaggt 231
           ||||| || |||||||| || ||||||||||| ||||||||||| |||||   |||||||
Sbjct: 202 tggagggcagactctgcactatctgatggcaaacctgataatgtgaatttggtaggaggt 261

                                                                       
Query: 232 tactatgatgctggtgataatgtaaaatttggatggccaatgtcatatactctatctttg 291
           |||||||||||||||||||||||||||||||||||||||||| |||||||| |  |||| 
Sbjct: 262 tactatgatgctggtgataatgtaaaatttggatggccaatggcatatactgttacttta 321

                                                                       
Query: 292 ttgagttgggctgcacttgagtatcagaaagagatagcttccatcaacctgcttggttac 351
           ||||||| ||| |||  ||||||    ||||||||| ||||  |||| | |||||||  |
Sbjct: 322 ttgagtttggcggcaactgagtacacaaaagagatatcttctgtcaatcagcttggtcgc 381

                                                                       
Query: 352 ctccaaaatgcaatccgttggggcacaaactaccttttaaaatctcatacttcatccacg 411
           || | |  ||||||| | ||||||||  |||||||| | |||| ||||||||||||||| 
Sbjct: 382 cttcgacgtgcaatcagatggggcactgactaccttatgaaatgtcatacttcatccacc 441

                   
Query: 412 acgtttta 419
           || |||||
Sbjct: 442 acatttta 449