Jatropha Genome Database
- JcCB0097241.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0097241.20 - phase: 2 /partial
(1324 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002601 phosphatidylcholine transfer protein, putative 918 0.0
29844.m003162 phosphatidylcholine transfer protein, putative 72 9e-12
>30068.m002601 phosphatidylcholine transfer protein, putative
Length = 1287
Score = 918 bits (463), Expect = 0.0
Identities = 892/1035 (86%)
Strand = Plus / Plus
Query: 290 tttcagttgcccagttgcatctcttggattgccgacgatgggattcaaaaggactctccc 349
||||||||||| |||||||| |||||| |||||||| || ||||||| || ||| |
Sbjct: 250 tttcagttgcctagttgcatgtcttgggttgccgacaatcatattcaaatcgattctgct 309
Query: 350 ccagccccaccttccttgagtgctgattgcagttccaaacagtcgcaaaaggaaagttcc 409
| || || |||||| | ||| ||||||||||||| |||| ||||||||| ||
Sbjct: 310 tctgcaccgccttcccttagttctgattgcagttcgtcacagcttgaaaaggaaacatca 369
Query: 410 ggtatagtaaatgaagatgatttagagcatttgtgcaagcttgtggaagagaaagatgga 469
||||||| ||||| ||||| ||||||||||||| ||| ||||||| |||||||||||
Sbjct: 370 agtatagtgaatgatgatgacctagagcatttgtgtaagattgtggatgagaaagatggt 429
Query: 470 ggtcctgcttggattcagatgatggatcgttctaccccaactatgagctataaagcttgg 529
||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||
Sbjct: 430 ggtcctgcttggattcagatgatggatcgttctactccaactatgacttatcaagcttgg 489
Query: 530 cggagggaccctgagaatggccccccgcaatatcgtagtagcactgtgtttgaggatgcc 589
|| || || ||||||| |||||| || |||||||| || || ||||| ||||||||||||
Sbjct: 490 cgcagagatcctgagactggccctccacaatatcgcagcagaactgtttttgaggatgcc 549
Query: 590 actcctgaaatggtgagggacttcttttgggatgatgaatttcgaatgaaatgggatgac 649
||||||||| | || |||||||| || ||||||||||||||||| |||||||||| |||
Sbjct: 550 actcctgaatttgtaagggactttttctgggatgatgaatttcggttgaaatgggacgac 609
Query: 650 atgcttatacatgctgcaactttggaggagtgccctaccacaggaacaatgatagttcag 709
||| | |||||||||||||||||||||||||||| || |||||||| ||||| || |||
Sbjct: 610 atgatgttacatgctgcaactttggaggagtgcccgacaacaggaaccatgatcgtccag 669
Query: 710 tgggtgcggaagtttcccttcttctgcagtgacagagagtacatcataggccgtcgaatt 769
||||| || ||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 670 tgggtacgcaagtttcccttcttctgtagcgacagagaatacatcataggtcgtcgaatt 729
Query: 770 tgggaatcaggtcgactgtattactgtgttacaaagggagttccttgcatgtctgttcca 829
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||
Sbjct: 730 tgggaatcaggtcgactgtactactgtgttacaaagggagttccttgctcctctgtgcca 789
Query: 830 aggcgcaacaaaccaagacgtgtggatttgtactattcaagctggtgcgttcgtgcagtt 889
|| || || ||||| |||||||| |||||||||||||||||||||||| |||| ||||||
Sbjct: 790 agacgtaataaacctagacgtgttgatttgtactattcaagctggtgcattcgcgcagtt 849
Query: 890 gaatcaaaaaggggggatggccagctgactgcatgtgaggtgctactgttccatcatgaa 949
||||| |||||||||||||||||||| | |||||||||||||||||| |||||||| |||
Sbjct: 850 gaatctaaaaggggggatggccagctaagtgcatgtgaggtgctactcttccatcacgaa 909
Query: 950 gatatgggtattccgtgggaaattgcaaagcttggagtccggcagggtatgtggggagct 1009
|| ||||||||||| |||||||||||||| |||||| | |||||||||||||||||||
Sbjct: 910 gacatgggtattccttgggaaattgcaaaacttggaattaggcagggtatgtggggagcg 969
Query: 1010 gtgaaaaagattgaaccgggtttacgtgcatatcaaaagcagagagcagctggagaccca 1069
||||| |||||||| || ||||| ||||||||||| ||||| ||||| ||||||| ||||
Sbjct: 970 gtgaagaagattgaccctggtttgcgtgcatatcagaagcatagagctgctggaggccca 1029
Query: 1070 ctttcacgttgtgctttcatggctcagatcaacaccaaagtaagcgcagattacctgaga 1129
|||||||| |||||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 1030 ctttcacgatgtgctttcatggctcagatcaacaccaaagtgagttcagactacctgaga 1089
Query: 1130 tctttagagagcaatgctaatagttcattggaggctgcaacgcaggattcatccaagaaa 1189
||| | || |||||||||| | ||||| |||| || || | |||||||||||||||
Sbjct: 1090 tctcttgaaagcaatgctagttattcatcagaggttgaaagcgatgattcatccaagaaa 1149
Query: 1190 tcggggggaaacatacctaggatgctagtgcttggtggggctattgctcttgcttgtact 1249
|||||||||||||||||||| |||| ||| ||||||||||||||||| | |||||||||
Sbjct: 1150 ccggggggaaacatacctaggctgcttgtggttggtggggctattgctttggcttgtact 1209
Query: 1250 cttgacagagggctgctgactaaagctgttatatttggagtagctagaagatttgcaaaa 1309
|||||| | || | | ||||| || ||||||||||| ||||| ||||||||||| |||
Sbjct: 1210 cttgaccggggattattaactaaggcagttatatttggtgtagccagaagatttgcgaaa 1269
Query: 1310 attggaaggaggttg 1324
|||||||||||||||
Sbjct: 1270 attggaaggaggttg 1284
Score = 60.0 bits (30), Expect = 4e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 112 catgtttatggctcccttgtggattgcggttattattggggttcttgtaggatgggcgtg 171
|||||||| || ||| || |||| ||| ||||| |||| ||||| ||||||||||| ||
Sbjct: 72 catgtttacggttcctttatggactgctgttatagttggagttctagtaggatgggcatg 131
Query: 172 gaagcctaaatgggccaacttgggta 197
||| || ||||||||||| |||||||
Sbjct: 132 gaaacccaaatgggccaatttgggta 157
>29844.m003162 phosphatidylcholine transfer protein, putative
Length = 1329
Score = 71.9 bits (36), Expect = 9e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 563 cgtagtagcactgtgtttgaggatgccactcctgaaatggtgagggacttcttttgggat 622
|||||||| ||||| ||||||||||| ||||| ||| |||| || || || || ||||||
Sbjct: 571 cgtagtagaactgtctttgaggatgctactccagaactggttagagattttttctgggat 630
Query: 623 gatgaatttcgaatgaaatgggat 646
||||| |||||| |||||||||||
Sbjct: 631 gatgagtttcgactgaaatgggat 654