Jatropha Genome Database

JcCB0095581.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0095581.10 + phase: 1 /partial
         (518 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008583 sterol isomerase, putative                              355   2e-97

>30128.m008583 sterol isomerase, putative
          Length = 663

 Score =  355 bits (179), Expect = 2e-97
 Identities = 401/475 (84%)
 Strand = Plus / Plus

                                                                       
Query: 39  atgtgttggtgggctttcactggtctcacacatgtaattcttgagggttattttgctttc 98
           ||||| |||||||| |||||||||||||||||  | || || ||||||||||||| ||||
Sbjct: 181 atgtgctggtgggccttcactggtctcacacacattatcctagagggttattttgttttc 240

                                                                       
Query: 99  tctcctgagttttacaaggagaagactccattttaccttgctgaagtttggaaagaatat 158
           || ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||| 
Sbjct: 241 tcccctgagttttacaaggataagacttctttttatcttgctgaagtttggaaagaatac 300

                                                                       
Query: 159 agtaaaggtgattcaagatatgcagcgagggatgccggaatagtttctgtggaaggattg 218
           ||||||||||||||||||||||| || || ||| | | | ||||  ||||||||||||||
Sbjct: 301 agtaaaggtgattcaagatatgctgcaagagattctgcagtagtggctgtggaaggattg 360

                                                                       
Query: 219 acagcagtactagagggtccagctagccttctagcagtctatgctattgcaacaaaaaag 278
           || |||||  ||||||||||||| || ||||| |||||||||||||||||  |    |||
Sbjct: 361 accgcagttttagagggtccagcaagtcttctggcagtctatgctattgctgctgggaag 420

                                                                       
Query: 279 tcatatagttacattctccagtttgcaatttctcttggacagctctatggaaccgctgta 338
           || ||||| ||||| || |||||||| ||||| || || ||||| |||||||| ||||||
Sbjct: 421 tcgtatagctacatacttcagtttgccatttcactcgggcagctttatggaactgctgta 480

                                                                       
Query: 339 tatttcataactgcgttcttggaaggcgacaactttgctgcaagtccatattactattat 398
           |||||| ||||| | | |||||| ||| | |||| |||  | |||||||||||| |||||
Sbjct: 481 tatttcctaactccctacttggatggctataactatgcatcgagtccatattaccattat 540

                                                                       
Query: 399 gcttactatattgctgcaaatgcttcatgggttgttataccatcgatcattagtatccgt 458
           || ||||| || | ||| |||||||| |||||||||||||||||  ||||| ||||||||
Sbjct: 541 gcatactacatcggtgctaatgcttcctgggttgttataccatcactcatttgtatccgt 600

                                                                  
Query: 459 tgttggaagaagatttgtgcagcatttgaagctcaaggccagaagaagaccaaaa 513
            | ||||||||||| |||||||||||| |||  ||||||||||  ||||||||||
Sbjct: 601 agctggaagaagatatgtgcagcatttcaagtgcaaggccagagaaagaccaaaa 655