Jatropha Genome Database
- JcCB0091031.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0091031.10 + phase: 0
(648 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29729.m002363 Transcription factor RF2b, putative 628 e-180
29804.m001495 Transcription factor RF2b, putative 202 2e-51
>29729.m002363 Transcription factor RF2b, putative
Length = 1068
Score = 628 bits (317), Expect = e-180
Identities = 524/593 (88%)
Strand = Plus / Plus
Query: 56 ggattattgcaaatcggcagtctgctgctcggtcaaaagaaaggaaagcccgctatatat 115
||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 476 ggattatagcaaatcggcagtctgctgctcggtcaaaggagaggaaagcccgctatatat 535
Query: 116 cagaacttgaaagaaaagtgcagacccttcagacagaagcaactacactttctgcacaac 175
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 536 cagaacttgaaagaaaagtgcagacccttcagacagaagcaacaacactttctgcccaac 595
Query: 176 tcacactattccagagagatacaacaggtctatctactgagaacacagagcttaagcttc 235
|||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||
Sbjct: 596 tcacactattccagagagatacaacaggactgactactgagaatacagagcttaagcttc 655
Query: 236 ggttgcaagctatggaacaacaggctcaattacgtgatgctctgaatgaagcactaaaga 295
|||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 656 ggttgcaagccatggaacaacaggctcatttacgtgatgctctgaatgatgcactaaaga 715
Query: 296 aggaagtagagagactcaaacttgccactggagaaatgatgacgccaacggatacctata 355
||||||||||||| ||||| |||| ||||||||||||||||| ||||| |||| ||||
Sbjct: 716 aggaagtagagaggctcaagtttgcgactggagaaatgatgacaccaacagatagctatc 775
Query: 356 atttaggaatgcaccatatgccatacacccaatcttccttctttctgccccagtctcaaa 415
|| | |||||| ||||||||||||| |||||||||||||| |||| |||||||| |||
Sbjct: 776 atctgggaatgaaccatatgccatatacccaatcttccttttttccaccccagtcgcaac 835
Query: 416 ctaggatagttaacagccaaaacatgcagatgcctcagtttcattcgttccagtccaaca 475
| ||| |||||||| |||||||||||| ||||| ||||||||| | |||||||| ||||
Sbjct: 836 caaggccagttaacacccaaaacatgcaaatgccacagtttcatcctttccagtctaaca 895
Query: 476 tgtcaactccacttcaacctatgggaggttcatctcattcacatgccttcccggatatgt 535
||| |||| ||| ||| |||| | | | |||||||||||||||||||| || ||||
Sbjct: 896 tgttaacttcacatcaggctattgctgccccgtctcattcacatgccttcccagagatgt 955
Query: 536 tgcagcaggatcctttgggacgattgcaggggcttgatataagtagcagaagcacgcttg 595
||| | ||||||| | ||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 956 tgccactggatcctcttggacgattgcaggggcttgatattggtagcagaagcactgttc 1015
Query: 596 tagttaaatctgagggtccgtcactttctgccagcgaaagcagcagcctttga 648
|||| |||||||| || || ||| |||||||||| |||||||||||| |||||
Sbjct: 1016 tagtgaaatctgaaggcccctcaatttctgccagtgaaagcagcagcatttga 1068
>29804.m001495 Transcription factor RF2b, putative
Length = 1161
Score = 202 bits (102), Expect = 2e-51
Identities = 216/254 (85%)
Strand = Plus / Plus
Query: 70 cggcagtctgctgctcggtcaaaagaaaggaaagcccgctatatatcagaacttgaaaga 129
|||||||||||||| || || ||||| ||||| ||||| |||||| ||||||||| |
Sbjct: 589 cggcagtctgctgcccgctctaaagagaggaaggcccgatatatactagaacttgagcgg 648
Query: 130 aaagtgcagacccttcagacagaagcaactacactttctgcacaactcacactattccag 189
||||| ||||||||||| || ||||| || || |||||||| ||||||||| ||||||||
Sbjct: 649 aaagttcagacccttcaaactgaagccacaactctttctgcccaactcacattattccag 708
Query: 190 agagatacaacaggtctatctactgagaacacagagcttaagcttcggttgcaagctatg 249
|| || |||||||| ||| ||| || |||| ||||||||||||||| | |||||||||
Sbjct: 709 agggacacaacaggactaagtacggaaaacatagagcttaagcttcgactacaagctatg 768
Query: 250 gaacaacaggctcaattacgtgatgctctgaatgaagcactaaagaaggaagtagagaga 309
|| |||||||||||||||||||||||| ||||||||||| | ||||||||||| |||||
Sbjct: 769 gagcaacaggctcaattacgtgatgctttgaatgaagcattgaagaaggaagttgagagg 828
Query: 310 ctcaaacttgccac 323
||||| |||||||
Sbjct: 829 ctcaagattgccac 842