Jatropha Genome Database
- JcCB0088661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0088661.10 + phase: 0 /partial
(2315 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29842.m003591 conserved hypothetical protein 404 e-112
>29842.m003591 conserved hypothetical protein
Length = 4200
Score = 404 bits (204), Expect = e-112
Identities = 383/446 (85%), Gaps = 15/446 (3%)
Strand = Plus / Plus
Query: 1 atttttgttaggcagaaaaaccgctgctcttcaaaagcaccagaaaatcccataaaggca 60
|||||||||||||||||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 1885 atttttgttaggcagaaaaatcgttgctcctcaaaagcgccagaaaatcccatcaaggca 1944
Query: 61 gttcggtggatgaaaacttctccattgaatgcagaggagatagaatgtattcaggaggga 120
||||| |||||||||| |||||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 1945 gttcgaaggatgaaaacctctccactgactgcagaggagatagaatccattcaggaggga 2004
Query: 121 ctcaaggttttcaaacacgattggatgtcagtatggagattcattgttccacatagggat 180
|||| |||||| ||||| ||||||||||| || || ||||||||||| ||||||||||||
Sbjct: 2005 ctcagggttttgaaacatgattggatgtcggtctgtagattcattgtcccacatagggat 2064
Query: 181 ccatcgttgctaccccgacagtggcggatggccctaggaactcagaggtcatataaatca 240
||||| || ||||| ||||||||||| || ||||| ||||||||||||||||| || | |
Sbjct: 2065 ccatcattactacctcgacagtggcgaattgcccttggaactcagaggtcatacaagtta 2124
Query: 241 gatgctgctaaaaaggaaaaacgacggatatatgaatcaaatagaagaaggtccaaaaca 300
|||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||
Sbjct: 2125 gatgctgctaaaaaggaaaaacgacgtatatatgaatcaaatagaagaagatgtaaaact 2184
Query: 301 gcagatttagccaactcgcaac---------------aggacaatcaggttgacattact 345
|||||||| || |||| ||||| |||||||||||||||||| |||
Sbjct: 2185 gcagatttggcaaactggcaacaggtatctgacaaggaggacaatcaggttgacagtacc 2244
Query: 346 ggtggagaaaataatagtggagatgattgtgttgataatgtaaatgaagcttatgttcat 405
||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 2245 ggtggagaaaacaatagtggagatgattatgtagataacccgaatgaagcttatgttcat 2304
Query: 406 caggcatttttagcggactggagacc 431
|||||||| ||||| || ||||||||
Sbjct: 2305 caggcattcttagcagattggagacc 2330
Score = 347 bits (175), Expect = 2e-94
Identities = 665/825 (80%), Gaps = 10/825 (1%)
Strand = Plus / Plus
Query: 614 tgcaattgaatcatcaactgtctaatacaacactgaatgctactaagtctcaaatttata 673
|||| ||||| |||||| | ||| ||||| ||| | |||| |||| |||||| |||||
Sbjct: 2483 tgcatttgaaccatcaagtttctgatacatcacagggtgctgctaaatctcaattttatt 2542
Query: 674 tgtggccatacaggactcatagaactgatggtgcacacttggtgaaattagcaccagact 733
||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2543 tgtggccatactggactcgtagaactgatggtgcacacttggtgaagttagcaccagact 2602
Query: 734 tgccccctgtaaatcttccaccatctgttcgtgtaatttctcaggcagctttcaaaagca 793
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2603 tgccccctgtaaatcttccaccgactgttcgtgtaatttctcagacagctttcaaaagca 2662
Query: 794 accagtgcagattgcctatgaagatacctacctcaggaggtagtggtgttgaggctggaa 853
||||||| | ||||||| ||| ||||| || ||||||| | ||| || ||| |
Sbjct: 2663 accagtgtgcagtgcctataaaggtacctgccctgggaggtactagtggagatgctag-- 2720
Query: 854 gagaaagagaaaacatagttcctcagcttctgca--agttgtgaattcaagagcgaccag 911
||| |||||| |||||||| |||| ||||| |||| |||| ||| |||||
Sbjct: 2721 --gaa--agaaaatatagttccgcagc--ctgcagttgttgcaaatttgagaagcaccag 2774
Query: 912 tttggctaaagctaaaagggataaaaccaatcaggtgacagataatatcacaaatgcatg 971
|||||| | ||||||||||||||| ||||||||| |||||| ||||||| | ||||
Sbjct: 2775 tttggcaatgactaaaagggataaaaggaatcaggtgggagataagatcacaacttcatg 2834
Query: 972 ctcagaagagcttacagctacgtgtgcagaagaatctgcagttcaaaatgatgtatgtgt 1031
|||||||| ||||| | | | ||||||| |||||| ||| ||||| ||||
Sbjct: 2835 tccagaagagtttacaagttcacatccagaagagtctgcaattctccatgatacctgtgc 2894
Query: 1032 tgctgaagagagaggcaatgattcagatcttcagatgcatcctttactttttcaggcccc 1091
||||||||||||||||| ||| ||||||||||||||||| || ||| | || ||| | ||
Sbjct: 2895 tgctgaagagagaggcactgagtcagatcttcagatgcaccccttattgttccagtctcc 2954
Query: 1092 tgaagatggatgtttgtcatattacccacccagctgcagcactgctactcctagttcttt 1151
|||||||||| || | || ||||| ||| ||||||||||||| || | ||||||||
Sbjct: 2955 tgaagatggacgtctatcgtattatccattgagctgcagcactggcgcttccagttcttt 3014
Query: 1152 tgctttctttgcaggaaatcagcctcagttgaatctgagtctctttcatgctccacatca 1211
| |||||||| ||| |||||||||||| |||||||| ||||| |||||| | ||| |
Sbjct: 3015 tactttcttttcagcaaatcagcctcaattgaatcttagtctttttcatagttcacgccc 3074
Query: 1212 agcaaatcaaatttctgattgtttgaataaatcttcaaagacaaaggaatccatttcagc 1271
|||||| || | | ||||||||| ||||||||||| |||||| |||||||| ||||||
Sbjct: 3075 agcaaaccatactgttgattgtttcaataaatcttcgaagacaggggaatccacttcagc 3134
Query: 1272 atcatgtgggattgacttccatccacttttgcaaagaactggggaagaaagtagtgaatt 1331
||| ||||| || ||||||||||| |||||||||||| | | ||||||| || ||| ||
Sbjct: 3135 atcttgtggtatcgacttccatccccttttgcaaagagcagaagaagaaaatattgactt 3194
Query: 1332 agctacagcatgttccaatacacatcagtttgtttgtttgggaggcaaatctgctcaatt 1391
||||| |||| |||| | |||| || | ||||||||||||||| ||||||||||||
Sbjct: 3195 tgctacttcatgctccattgcacaccaatatgtttgtttgggaggaaaatctgctcaacc 3254
Query: 1392 tcaaaatccttcagatgttgttcagaccaaattaccagtcaatag 1436
||| ||||||| || | |||||||| |||| ||||||||||||
Sbjct: 3255 tcagaatcctttaggagcagttcagacaaaatcaccagtcaatag 3299
Score = 172 bits (87), Expect = 6e-42
Identities = 180/211 (85%)
Strand = Plus / Plus
Query: 1733 acatggatgatgtaggagaccagtctcaccctgaaatcataatggaacaggaagagttga 1792
||||||| ||| |||||||||| ||| ||| || || | |||||||||||||| | |
Sbjct: 3536 acatggaggataaaggagaccaggctcccccagagattgtgatggaacaggaagaactaa 3595
Query: 1793 gtgactcagatgaagaaactgaagaacatgtagaatttgagcgcgaggagatggctgatt 1852
| |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||
Sbjct: 3596 gcgactcagatgaagaaactgaagaacatgtagagtttgagtgtgaggagatggctgatt 3655
Query: 1853 ctgatggggaggagggtttgggtggtgaactagttactgaagtgccagataaggagatta 1912
||||||||||||||| |||||| |||||| | || ||||||||| |||||||||| ||
Sbjct: 3656 ctgatggggaggaggttttgggctgtgaaccaattgctgaagtgcaagataaggagtttc 3715
Query: 1913 catgttctgcaactgaagaagttacaactga 1943
|| || ||||| |||||||||||||||||
Sbjct: 3716 caagtattgcaatggaagaagttacaactga 3746
Score = 135 bits (68), Expect = 1e-30
Identities = 211/258 (81%), Gaps = 3/258 (1%)
Strand = Plus / Plus
Query: 2053 tggttgactttagattcttgtgcagctgttgaccctccaaggataaatgcaaagtatgaa 2112
||||| ||||||||||| |||||| ||||||| ||||| || | || || ||| |||||
Sbjct: 3883 tggttaactttagattcatgtgcatctgttgatcctccgagcaggaaggctaagcatgaa 3942
Query: 2113 gaatgtacaattggtgcttgtcctgttgccaaaaaattgatttcaggacgtccaaacaga 2172
|| |||| | |||||| ||||||||| | |||||| || |||||| ||| ||||||||
Sbjct: 3943 gagtgtatacttggtgtttgtcctgtcgtcaaaaatttagcttcaggtcgttcaaacaga 4002
Query: 2173 tcatgcaagaaaacgacacaaagcatgagaactgttgtgacagagaaggatgtcatggac 2232
|| |||||||| ||| |||| | || || || |||||||| ||||| |||||
Sbjct: 4003 tcctgcaagaagttaaca---agcacaaaaagtggtgcaacagagaaagatgttgtggac 4059
Query: 2233 atggcacaacaactcagccttggccctcttgctgtttccacgttgaagaaacccaggaag 2292
||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 4060 atggcacaacaactcagccttggtcttcttgctgtttccacattgaagaaacccaggaag 4119
Query: 2293 cgagcttgtcgaacaaat 2310
|| || |||||||||||
Sbjct: 4120 cgtgccagtcgaacaaat 4137