Jatropha Genome Database

JcCB0087221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0087221.10 - phase: 0 
         (357 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006482 thump domain protein, putative                          151   3e-36

>30169.m006482 thump domain protein, putative
          Length = 1149

 Score =  151 bits (76), Expect = 3e-36
 Identities = 127/144 (88%)
 Strand = Plus / Plus

                                                                       
Query: 64  aagcaacgttatctcccccataataagccagtgaagaagaagggggcgtaccctttacac 123
           ||||| ||||| || ||||| ||||||||||| |||||||||||  | ||||| ||||| 
Sbjct: 52  aagcagcgttaccttccccacaataagccagtaaagaagaagggatcatacccattacat 111

                                                                       
Query: 124 ccaggagtgcagggtttctttatcacttgtgatggtggcagagagcgtcaagcctctcat 183
           |||||||||||||| |||||||| || ||||||||||||||||| || ||||| ||||||
Sbjct: 112 ccaggagtgcagggcttctttattacctgtgatggtggcagagaacgccaagcttctcat 171

                                   
Query: 184 gaggccattaatgttattgattct 207
           ||||| ||||||||||||||||||
Sbjct: 172 gaggctattaatgttattgattct 195