Jatropha Genome Database
- JcCB0087171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0087171.10 - phase: 0 /partial
(1350 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014418 Auxin response factor, putative 842 0.0
30128.m008545 transcription factor, putative 135 8e-31
29609.m000587 Auxin response factor, putative 72 1e-11
29742.m001397 Auxin response factor, putative 62 9e-09
30068.m002516 hypothetical protein 60 4e-08
>30147.m014418 Auxin response factor, putative
Length = 2535
Score = 842 bits (425), Expect = 0.0
Identities = 697/788 (88%)
Strand = Plus / Plus
Query: 556 caaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgttagctccaaaaggctt 615
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 625 caaccgcgaaggcacttgcttcaaagtggatggagcgtgtttgttagctccaaaaggctt 684
Query: 616 gttgctggagatgcctttatatttttaagaggtgagaatggagaacttagagttggtgtc 675
|||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 gttgctggtgatgcgtttatatttttaagaggtgagaatggagaactccgagttggtgtt 744
Query: 676 agaagggcaatgagacagcagggaaatgttccatcttctgtaatatccagtcacagcatg 735
||| | || |||||||| ||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 745 agacgagccatgagacaacagggtaatgttccatcatctgtcatatccagccacagcatg 804
Query: 736 catctagatgtgcttgctacagcatcgcgtgctgtctctanaggaaccatgttcaccgtt 795
||||||| ||| ||||||||||||| || ||| |||||| ||||||| ||||||| |||
Sbjct: 805 catctaggtgttcttgctacagcatggcatgccatctctacaggaaccttgttcactgtt 864
Query: 796 tattataagccaaggacaagcccgtctgagtttattgttccatttgatcggtatatggag 855
||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||
Sbjct: 865 tattataagccaaggacaagccctgctgagttcattgttccatttgatcgatacatggag 924
Query: 856 tctgtcaagaacaattattctattggaatgaggtttaaaatgagatttgaaggagaagaa 915
||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 925 tctgtcaagaacaattattgtattgggatgagatttaaaatgagatttgaaggggaagaa 984
Query: 916 gctcctgagcaaagatttactggcacaattgttggaattgaagatgctgattccacaagg 975
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 985 gctcctgagcaaagattcactggaacaattgttggaattgaagatgctgattccaaaagg 1044
Query: 976 tggccagaatctaaatggagatgccttaaggtgaggtgggatgaaacttctgctatacct 1035
|||| |||||| |||||||||| || |||||||| ||||||||||||||| ||||||||
Sbjct: 1045 tggcgagaatccaaatggagatctctcaaggtgagatgggatgaaacttctactatacct 1104
Query: 1036 cgtccagatagagtttcaccatggagtatagagcctgctctggctcctccggcactgaat 1095
||||| ||| |||||||||| |||||| | |||||||||||||||||||| ||| |||||
Sbjct: 1105 cgtccggatcgagtttcaccgtggagtgtggagcctgctctggctcctcctgcattgaat 1164
Query: 1096 cctcttccagtgcccagacctaaaagacctcgatccagcatggttccttcatctccagac 1155
|| |||||||| ||||| |||||||| || ||||||| |||||| |||||||| || |||
Sbjct: 1165 ccccttccagtccccaggcctaaaaggccccgatccaacatggtgccttcatccccggac 1224
Query: 1156 tcctctgttcttgctagagaaggttcatccaaagtaactgcagaccctacactgccgatt 1215
|| || |||||| ||||||| |||||||| |||||||| ||||||| ||| || | |
Sbjct: 1225 tcttcagttcttactagagacggttcatcaaaagtaaccatagaccctccaccacctagt 1284
Query: 1216 ggatattcaagggtcttgcaaggtcaagaattcgcgaccttgagaagcagtgttgtggag 1275
|||||||| |||||||||||||||||||||||| |||||||| || | | | ||| ||||
Sbjct: 1285 ggatattctagggtcttgcaaggtcaagaattctcgaccttgcgaggaaattttgcggag 1344
Query: 1276 agcaacgaatctgacactgctgaaaagtcagttatgtggccgtcttctatagatgatgag 1335
||||| ||||| || |||||||||||||| || |||||||| | || ||||||| |||
Sbjct: 1345 agcaatgaatcagaaactgctgaaaagtctgtcatgtggccaccctcagtagatgacgag 1404
Query: 1336 aagattga 1343
||||||||
Sbjct: 1405 aagattga 1412
Score = 272 bits (137), Expect = 5e-72
Identities = 386/469 (82%)
Strand = Plus / Plus
Query: 1 atggaggggcagaaaggtcattctagacgtcaggcatcggcaagagacgctgaaactgcg 60
||||| || |||||||||||||||| |||| || || || | ||||||||||| ||
Sbjct: 94 atggaaggccagaaaggtcattctactcgtccggtctctgctaaagacgctgaaaaggct 153
Query: 61 ttgtatactgagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggt 120
| ||||| ||||| ||| |||||||||| ||||| || || ||||||||||||||
Sbjct: 154 ctttataccgagctttggaatgcctgtgctggtcctttagtcaccgttcctcgtgagaac 213
Query: 121 gagcgcgtgttctactttcctcagggacacatcgaacaggttgaggcgtcaacaaatcaa 180
|||| ||| | |||||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct: 214 gagctcgtttattactttcctcagggtcacatagagcaggtagaggcatcaacaaatcag 273
Query: 181 gtggccgaccagcagatgccggtatattgtcttccatcaaagatcttatgtcgcgttatc 240
| || |||||||||||||| || ||| |||||||||||||||||| |||||||| |||
Sbjct: 274 ttagcagaccagcagatgccagtttataatcttccatcaaagatcttgtgtcgcgtgatc 333
Query: 241 aacgtcctgttgaaggccgaaccagatacggacgaggtgtatgcccaagtgacactggtt 300
||||||| ||||||||||||||||||| || ||||||| ||| ||||| || | ||
Sbjct: 334 aacgtccaactgaaggccgaaccagatactgatgaggtgtttgcacaagtcactttactt 393
Query: 301 cctgaggccatacaagatgagaatgctgttgagaagcagccttcccaacctcctccaccc 360
|| ||| |||| ||||| |||||||| || |||| | ||| | |||||||| |||||
Sbjct: 394 cccgagcccatccaagacgagaatgcagtgaagaaagaccctcctcaacctccaccacca 453
Query: 361 cgatttcatgtgcattcattttgtaaaactttgactgcatcagacacaagcactcatggt 420
|||||||||||||||||||||||||||| ||||||||||||| || || || |||||
Sbjct: 454 agatttcatgtgcattcattttgtaaaaccctgactgcatcagatactagtacccatggc 513
Query: 421 gggttttctgtgcttaggcgacatgctgttgaatgtctgccacctctgg 469
|||||||||||||| ||||||||||||| ||| |||||||| |||||||
Sbjct: 514 gggttttctgtgctcaggcgacatgctgatgagtgtctgccgcctctgg 562
>30128.m008545 transcription factor, putative
Length = 2364
Score = 135 bits (68), Expect = 8e-31
Identities = 529/683 (77%)
Strand = Plus / Plus
Query: 370 gtgcattcattttgtaaaactttgactgcatcagacacaagcactcatggtgggttttct 429
|||||||| |||||||| ||| | || || ||||| ||||| ||||| ||||| |||||
Sbjct: 361 gtgcattccttttgtaagactcttacagcctcagatacaagtactcacggtggattttca 420
Query: 430 gtgcttaggcgacatgctgttgaatgtctgccacctctggatatgtcaaggcagccacca 489
|| | ||||| || |||| ||||||||| || || ||||||||||| || || |||
Sbjct: 421 gttttgaggcgccacgctgatgaatgtctacctccactggatatgtctttacaacctcca 480
Query: 490 actcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccagcacattttt 549
|||||||||| || || |||||||| | ||||||||||||||| |||| || || |||
Sbjct: 481 gctcaggaattagtggccaaggatttacttggaaatgaatggcggttccgccatatcttt 540
Query: 550 cgagggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgttagctccaaa 609
||||| |||||| | || ||| | ||||||||||| ||||| | || ||||| | |||
Sbjct: 541 cgaggtcaaccgaggagacaccttcttcaaagtggttggagcctatttgttagtgcaaaa 600
Query: 610 aggcttgttgctggagatgcctttatatttttaagaggtgagaatggagaacttagagtt 669
| |||||| || |||||||| ||||| ||| | |||||||| | ||| || ||| | ||
Sbjct: 601 aagcttgtagcaggagatgcatttatctttctcagaggtgaaactggggagcttcgtgta 660
Query: 670 ggtgtcagaagggcaatgagacagcagggaaatgttccatcttctgtaatatccagtcac 729
|| || ||| | || ||||||||| | ||||||||||||||| | || || ||||||
Sbjct: 661 ggagtaagacgtgctatgagacagtcatgtaatgttccatcttctttcatgtctagtcac 720
Query: 730 agcatgcatctagatgtgcttgctacagcatcgcgtgctgtctctanaggaaccatgttc 789
|| |||||| | | | | ||||| || |||| || ||| || || | |||||| ||||||
Sbjct: 721 agtatgcatattggtattcttgccactgcatggcatgcagtttcaacaggaacaatgttc 780
Query: 790 accgtttattataagccaaggacaagcccgtctgagtttattgttccatttgatcggtat 849
|| || || || || |||||||| || || | ||||||||| |||| | ||| |||
Sbjct: 781 actgtctactacaaaccaaggactagtcctgccgagtttattattcccatggataaatat 840
Query: 850 atggagtctgtcaagaacaattattctattggaatgaggtttaaaatgagatttgaagga 909
||||| |||||||| ||||| | | |||| || |||||||| || ||||| |||||||
Sbjct: 841 atggaatctgtcaaaaacaactttactatagggatgaggttcaagatgaggtttgaagct 900
Query: 910 gaagaagctcctgagcaaagatttactggcacaattgttggaattgaagatgctgattcc 969
||||||||||| || || || ||| ||||| | ||||| ||||| |||||||| ||
Sbjct: 901 gaagaagctccagaacagaggtttttgggcactgtgattggagttgaacatgctgatccc 960
Query: 970 acaaggtggccagaatctaaatggagatgccttaaggtgaggtgggatgaaacttctgct 1029
| |||||||| || | |||||||||||| |||||| | ||||||||||||||| ||
Sbjct: 961 aagaggtggcccacttcaagatggagatgcctcaaggtgcgctgggatgaaacttcttct 1020
Query: 1030 atacctcgtccagatagagtttc 1052
| | ||| |||||||| |||||
Sbjct: 1021 cttcatcgcccagatagggtttc 1043
Score = 56.0 bits (28), Expect = 6e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 70 gagctgtggcatgcctgtgccggtcccttggtaaccgttcctcgtgaaggtgagcgcgtg 129
||||||||||| || ||||| ||||| ||||| || || ||||| |||| |||| |||
Sbjct: 64 gagctgtggcacgcttgtgctggtcctttggtgacggtgcctcgccaaggagagctcgtt 123
Query: 130 ttctactttcctcagggacacatcgaacaggt 161
|||||||||||||| || || ||||| |||||
Sbjct: 124 ttctactttcctcaaggtcatatcgagcaggt 155
>29609.m000587 Auxin response factor, putative
Length = 2016
Score = 71.9 bits (36), Expect = 1e-11
Identities = 285/368 (77%)
Strand = Plus / Plus
Query: 373 cattcattttgtaaaactttgactgcatcagacacaagcactcatggtgggttttctgtg 432
||||||||||| || || | ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 352 cattcattttgcaagacacttactgcttcagacacgagcactcatggtggtttttctgta 411
Query: 433 cttaggcgacatgctgttgaatgtctgccacctctggatatgtcaaggcagccaccaact 492
||| | | ||||| | ||| ||| | || || ||||||||||| ||||||||
Sbjct: 412 cttcgaaggcatgcagatgattgtttacctccactggatatgtcccaacagccaccttgg 471
Query: 493 caggaattggttgcgaaggatttgcatggaaatgaatggcgtttccagcacatttttcga 552
|||||| | ||||| | ||| |||| |||||| |||||| ||||| |||||||||||
Sbjct: 472 caggaactagttgccactgatctgcacggaaatcaatggcatttccgtcacatttttcgg 531
Query: 553 gggcaaccgcgaaggcacttgcttcaaagtggatggagtgtgttcgttagctccaaaagg 612
|| ||||| || | ||||| || || ||| |||||||| || |||||||| |||| |
Sbjct: 532 ggtcaacctagacgtcacttactcacaactgggtggagtgtctttgttagctcaaaaaag 591
Query: 613 cttgttgctggagatgcctttatatttttaagaggtgagaatggagaacttagagttggt 672
| || || |||||||| ||||| || || || || || |||||||||||| | |||||
Sbjct: 592 ttagtggcaggagatgcatttatcttcttgaggggagaaaatggagaacttcgtgttgga 651
Query: 673 gtcagaagggcaatgagacagcagggaaatgttccatcttctgtaatatccagtcacagc 732
|| || ||| |||||||| ||| |||| | ||||||||||| ||||| || || |||
Sbjct: 652 gtaaggaggcttatgagacaacagacaaatatgccatcttctgtcatatctagccaaagc 711
Query: 733 atgcatct 740
||||||||
Sbjct: 712 atgcatct 719
Score = 52.0 bits (26), Expect = 9e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 873 ttctattggaatgaggtttaaaatgagatttgaaggagaagaagctcctgagcaaagatt 932
|||| |||| ||||||||||| ||||||||||| || || |||| |||||||| || ||
Sbjct: 852 ttctgttgggatgaggtttaagatgagatttgagggtgaggaagttcctgagcggaggtt 911
Query: 933 tactggcacaattgttgg 950
| |||||| ||||||||
Sbjct: 912 cagtggcactattgttgg 929
>29742.m001397 Auxin response factor, putative
Length = 2004
Score = 61.9 bits (31), Expect = 9e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 490 actcaggaattggttgcgaaggatttgcatggaaatgaatggcgtttccagcacattttt 549
||||||||| ||||||| |||||| | ||||| |||| ||||| || | |||||||||
Sbjct: 526 actcaggaactggttgcaaaggatcttcatgggtatgagtggcgctttaaacacattttt 585
Query: 550 cgagggcaaccgcgaaggcacttgctt 576
|||| |||||||||||||| ||||||
Sbjct: 586 agaggacaaccgcgaaggcatttgctt 612
>30068.m002516 hypothetical protein
Length = 2085
Score = 60.0 bits (30), Expect = 4e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 883 atgaggtttaaaatgagatttgaaggagaagaagctcctgagcaaagatttactggcaca 942
||||| || |||||||| |||||||| ||||| |||||||| ||||||| | || |||
Sbjct: 880 atgagattcaaaatgaggtttgaaggcgaagactctcctgagagaagattttcaggtaca 939
Query: 943 attgttggaattgaagat 960
||||||||| ||||||||
Sbjct: 940 attgttggagttgaagat 957