Jatropha Genome Database

JcCB0086731.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0086731.10 + phase: 0 
         (858 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005344 r2r3-myb transcription factor, putative                 129   3e-29
29794.m003366 r2r3-myb transcription factor, putative                  76   4e-13
30190.m011268 r2r3-myb transcription factor, putative                  64   1e-09
29589.m001239 r2r3-myb transcription factor, putative                  52   6e-06

>29912.m005344 r2r3-myb transcription factor, putative
          Length = 606

 Score =  129 bits (65), Expect = 3e-29
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaagagctccatgttgtgacaaagctaacgttaaacgagggccttggtctcctgaa 60
           ||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1   atgggaagagcaccgtgttgtgacaaagctaacgtgaaaagagggccttggtctcctgaa 60

                                                                    
Query: 61  gaagatgccactctcattaactatcttcaaaaacatggcacttctggcaattggatt 117
           ||||||||||| ||||  |||||| |||| | |||||| |||  |||||||||||||
Sbjct: 61  gaagatgccaccctcaagaactatattcatacacatggaactggtggcaattggatt 117


>29794.m003366 r2r3-myb transcription factor, putative
          Length = 966

 Score = 75.8 bits (38), Expect = 4e-13
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgggaagagctccatgttgtgacaaagctaacgttaaacgagggccttggtctcctgaa 60
          ||||| ||||||||||||||||| ||||| ||||| ||| |||| || |||||||| |||
Sbjct: 1  atgggtagagctccatgttgtgataaagcaaacgtgaaaagaggaccatggtctcccgaa 60

                        
Query: 61 gaagatgccactct 74
          |||||||| |||||
Sbjct: 61 gaagatgctactct 74


>30190.m011268 r2r3-myb transcription factor, putative
          Length = 999

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 130 aaagcagggcttaaacgatgtggcaagagttgtcgtttgagatggttgaattatttgaga 189
           ||||| |||||| || | |||||||| ||||||||||| |||||| | ||||||||||| 
Sbjct: 127 aaagctgggcttcaaaggtgtggcaaaagttgtcgtttaagatggattaattatttgagg 186

                   
Query: 190 ccagatat 197
           ||||||||
Sbjct: 187 ccagatat 194


>29589.m001239 r2r3-myb transcription factor, putative
          Length = 150

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 1  atgggaagagctccatgttgtgacaa 26
          ||||||||||||||||||||||||||
Sbjct: 1  atgggaagagctccatgttgtgacaa 26