Jatropha Genome Database
- JcCB0086551.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0086551.20 + phase: 0
(1116 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004619 conserved hypothetical protein 159 4e-38
>29848.m004619 conserved hypothetical protein
Length = 1176
Score = 159 bits (80), Expect = 4e-38
Identities = 475/604 (78%), Gaps = 2/604 (0%)
Strand = Plus / Plus
Query: 246 gaagaaaatagcattcctgtttctcaccaccacacccctccactttgctccgctatggga 305
|||||||||||| ||| |||||||||| || || || || ||||| ||||| || |||||
Sbjct: 309 gaagaaaatagccttcttgtttctcactacaactccacttcacttcgctccactttggga 368
Query: 306 actttactttgaccaagctcccaaacaactatttaacatctatatccatgcggatccgag 365
||| ||||||||||| | || |||||| | |||||||||||||||||||| || || ||
Sbjct: 369 actatactttgaccataccccaaaacaattgtttaacatctatatccatgcagacccaag 428
Query: 366 ttataagtacgacccgccgttctcaggcatgttcgctaaccgagttattcactccgaacc 425
| | | |||||||||||||| || || ||||| ||||| ||||| | || ||||
Sbjct: 429 tcacgactacgacccgccgttttctggtgtgttcttcaaccgtgttatcccttcaaaacc 488
Query: 426 tgcgaaacggttcacccctactctcgcctcggcggcgcgtcgtttacttgcacatgcgct 485
| |||| | |||| |||||| ||| ||||||||||||||||| || || |||||
Sbjct: 489 ctctcaacgctattcccccactctcatctcagcggcgcgtcgtttactcgcccacgcgct 548
Query: 486 cgtccacgatccttcaaatgccatgtttgctctcctgtcaccatcttgcattcccttgca 545
| || || ||| | |||||||||||||| || || || || ||||| || || || ||
Sbjct: 549 tttgcatgaccctgccaatgccatgtttgcccttctttctccttcttgtatacctttaca 608
Query: 546 ctcttttaatttcacctacaaaacgttggctcgatccaagaagagcttcatcgagatact 605
|||||||| ||||| ||||| || || || |||| ||| ||||| ||||||||| |
Sbjct: 609 ttcttttaacttcacttacaataccttaattcactccaggaaaagctttatcgagatatt 668
Query: 606 cagaaacgagagttgggcgtacgacagatgggcggcgcgtggtccagacgcgatgctacc 665
| ||| ||| ||| |||||| || |||||||||||||| ||||| |||||| | ||
Sbjct: 669 gaaaaatgaggaatggatgtacgaaaggtgggcggcgcgtggaccagatgcgatgttgcc 728
Query: 666 ggaggtgaagctagaggattttcggattgggtcccaattttgggtgttgtcacgtgagca 725
|||||||||||| || || || || || ||||| || |||||||||||| ||||| ||||
Sbjct: 729 ggaggtgaagctggaagagttccgaatagggtcgcagttttgggtgttgacacgtaagca 788
Query: 726 cgcgagggtcgtcgttggtgaccagatgatatgggctaaattcaataagacgtgcgtagt 785
|||||| | ||||| ||| |||| ||| ||||| || || ||| |||||||| ||
Sbjct: 789 tgcgaggcttgtcgtcaatgaacagaggatttgggcaaagtttaatcgaacgtgcgtggt 848
Query: 786 agagg-acgcgtgttatccggaggagaattactttcctacccttatccacatgaaggacc 844
|||| || |||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 849 -gaggcactcgtgctatccagaagaaaattactttcctacccttatccacatgaaggacc 907
Query: 845 cacg 848
||||
Sbjct: 908 cacg 911