Jatropha Genome Database
- JcCB0086551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0086551.10 - phase: 0 /partial
(1049 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004621 conserved hypothetical protein 476 e-133
29927.m000613 conserved hypothetical protein 143 2e-33
>29848.m004621 conserved hypothetical protein
Length = 1176
Score = 476 bits (240), Expect = e-133
Identities = 375/420 (89%)
Strand = Plus / Plus
Query: 1 atgcctagaccaggccccagaccttatgaatgtgttagaagagcttggcacagtgataga 60
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 atgcctagaccaggccctagaccttatgaatgtgttagaagagcttggcatagtgataga 60
Query: 61 caccaacccatcagaggttctctcattcaagaaattttcagagttgtcaatgaagttcat 120
||||| ||| | || |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 61 caccagcccgttaggggttctcttattcaagaaattttcagagttgttaatgaggttcac 120
Query: 121 agctctgcaactaagaagaacaaggaatggcaagagaagcttcctgttgttgttttgaga 180
||| |||| ||||||||||||||||| ||||||||||| ||||||||||| || |||| |
Sbjct: 121 agccctgctactaagaagaacaaggagtggcaagagaaacttcctgttgtcgtcttgaaa 180
Query: 181 gcagaagaaattatgtattccaaagccaattctgaagctgaatatatggaccttaaaact 240
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 gcagaagaaattatgtactccaaagccaattctgaggctgaatatatggaccttaaaact 240
Query: 241 ctttgggatcggacaaatgatgccattaatacaattattcggcgtgatgaaagtactgaa 300
|||||||| | |||||||| ||||||||||| |||| || || || |||||||||
Sbjct: 241 ctttgggagagagtaaatgatgttattaatacaatcgttcgacgagacgagagtactgaa 300
Query: 301 actggagagcttcttcaaccttgcattgaagctgctcttaatttgggatgcactccaaga 360
|||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 actggagatcttcttctaccctgcattgaagctgctcttaatttgggatgcactccgaga 360
Query: 361 agagcctccaggagccaacgaaactgtaatccgaggtgttaccttagtcctagcactcaa 420
||| |||| |||||||| ||||| |||||||| ||||| ||||| | |||| ||||||||
Sbjct: 361 agaacctcaaggagccagcgaaattgtaatcctaggtgctacctcactcctggcactcaa 420
Score = 137 bits (69), Expect = 2e-31
Identities = 183/221 (82%)
Strand = Plus / Plus
Query: 487 cagtgcattcctaattattctaacttcataaaatccacaatcatgaattcaacccaattg 546
|||||||| ||||| |||| |||| |||||| || ||||| ||||||||||||| |||
Sbjct: 469 cagtgcatacctaactatttggacttgataaaacccgcaatcgtgaattcaacccatttg 528
Query: 547 ggttcagaattacaaaaccttatttgccaaaacatcagtatcgcttctaacaaatttctc 606
|| || ||||| ||||||||| ||||||| || |||||| || | |||||||||||||||
Sbjct: 529 ggatctgaattgcaaaaccttgtttgccagaatatcagtgtcacatctaacaaatttctc 588
Query: 607 tttcgaactgataacagtcgtctatctaactacaaccagtattttcccatggagaatcgt 666
|| ||||||||| || || |||||||||| ||||| | ||||| ||||||||| |
Sbjct: 589 ttggcaactgataatggttgtttatctaactataaccaatcctttcctatggagaattat 648
Query: 667 tctgtgtcaagcttgtactcagtttatcccttgtactatgg 707
|| |||||||||||||||||||||| || |||| ||||||
Sbjct: 649 cctatgtcaagcttgtactcagtttacccgttgtgctatgg 689
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 873 tgaaattggttgtgatctatcattgcggttgggctctctttcagctgct 921
||||| ||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 816 tgaaactggatgtgatctatcattgcgtttgggctctctatctgctgct 864
>29927.m000613 conserved hypothetical protein
Length = 1122
Score = 143 bits (72), Expect = 2e-33
Identities = 321/404 (79%)
Strand = Plus / Plus
Query: 1 atgcctagaccaggccccagaccttatgaatgtgttagaagagcttggcacagtgataga 60
||||| || ||||| || ||||| ||||| ||||| |||||||||||||| || ||||||
Sbjct: 1 atgccgaggccagggccgagaccatatgagtgtgtgagaagagcttggcatagcgataga 60
Query: 61 caccaacccatcagaggttctctcattcaagaaattttcagagttgtcaatgaagttcat 120
||||||||||| ||||||||| ||||||| |||||||||| || |||| ||| ||||
Sbjct: 61 caccaacccatgagaggttctgtcattcatcaaattttcagggtcgtcagtgagactcat 120
Query: 121 agctctgcaactaagaagaacaaggaatggcaagagaagcttcctgttgttgttttgaga 180
|| | ||||| ||||| || || |||||||||||||||||| ||||||| || | |
Sbjct: 121 agtgccattactaaaaagaataaagagtggcaagagaagcttcctattgttgtgttaaaa 180
Query: 181 gcagaagaaattatgtattccaaagccaattctgaagctgaatatatggaccttaaaact 240
|| || ||||| |||||||| ||||| || ||||| || || |||||| ||| | |||
Sbjct: 181 gctgaggaaatcatgtattctaaagcaaactctgaggccgagtatatgaacccagatact 240
Query: 241 ctttgggatcggacaaatgatgccattaatacaattattcggcgtgatgaaagtactgaa 300
| |||||| | ||||||||||||||| || |||||||| | ||||| |||| ||||
Sbjct: 241 ttatgggatagagtaaatgatgccattaacaccattattcgtagagatgagagtaatgaa 300
Query: 301 actggagagcttcttcaaccttgcattgaagctgctcttaatttgggatgcactccaaga 360
|| || || ||| | | ||||| |||||||||||||| ||||| || |||| ||||
Sbjct: 301 accggggaacttttgcctccttgtattgaagctgctctcaatttaggctgcattccagtt 360
Query: 361 agagcctccaggagccaacgaaactgtaatccgaggtgttacct 404
||||| || || |||||||| || ||||||| ||| |||||||
Sbjct: 361 agagcttcaagaagccaacggcacagtaatcctaggagttacct 404