Jatropha Genome Database
- JcCB0085561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0085561.10 + phase: 1 /pseudo/partial
(948 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29693.m001985 (S)-2-hydroxy-acid oxidase, putative 987 0.0
29727.m000485 (S)-2-hydroxy-acid oxidase, putative 74 2e-12
29727.m000486 (S)-2-hydroxy-acid oxidase, putative 68 1e-10
29727.m000481 (S)-2-hydroxy-acid oxidase, putative 68 1e-10
29727.m000482 (S)-2-hydroxy-acid oxidase, putative 62 6e-09
>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
Length = 1110
Score = 987 bits (498), Expect = 0.0
Identities = 705/774 (91%)
Strand = Plus / Plus
Query: 81 ccccgcattcttattgatgtgagcaagattgacatgaccacaagtgtcttgggcttcaaa 140
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 145 ccccgcattcttattgatgtgagcaagattgacatgaccacatctgtcttgggattcaag 204
Query: 141 atttccatgcctatcatgattgctccaacagccatgcaaaaaatggctcaccctgaagga 200
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 205 atttcaatgcctatcatgattgctccaacagccatgcagaaaatggcccacccagaagga 264
Query: 201 gagtatgccacagcaagggcagcttcagcagctggcacaattatgacattatcctcatgg 260
|| || || ||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 265 gaatacgcaacagcaagggcagcttcagcagctggcacaattatgacactatcttcatgg 324
Query: 261 gctacttccagtgtagaggaggttgcttcaactgggcctggcattcgctttttccagctc 320
|||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 325 gctacttccagtgtcgaggaggttgcttcgacaggacctggcattcgctttttccagctc 384
Query: 321 tatgtctacaaagacaggaatgttgtagctcagcttgtgagaagggctgagagggctggt 380
||||| |||| || |||||||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 385 tatgtgtacagggataggaatgtggtagctcagcttgtaagaagagctgaaagggctggt 444
Query: 381 ttcaaggctatcgccctcactgtggacactccaagacttggccggagagaagctgatatc 440
|||||||| || |||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 445 ttcaaggcaattgccctcactgtggatactccaagacttggccgaagagaagctgacatc 504
Query: 441 aagaacagatttaccttgccaccatttttgactttgaagaattttgagggcttgaatctt 500
|| ||||||||||| |||| |||||||||||||||||||| ||||| || ||| |||||
Sbjct: 505 aaaaacagatttactctgccgccatttttgactttgaagaactttgaaggattggatctt 564
Query: 501 ggccaaatggacaaggctgatgattctggactagcttcatatgttgctggccaaattgac 560
|| ||||||| ||| |||||| ||||||||| | ||||||||||||||||||||||||
Sbjct: 565 ggaaaaatggataagagtgatgactctggactatcatcatatgttgctggccaaattgac 624
Query: 561 cggacacttagctggaaggatgtgaagtggcttcagacaatcacatcattgccaatcctg 620
|| |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 625 cgaacacttagctggaaggatataaagtggcttcagacaatcacatcactgccaatcctg 684
Query: 621 gttaagggtgtccttactgctgaggatgcaagactagccatacagaatggagctgcagga 680
|| |||||||| || ||||| |||||| | || |||||||| |||||||||||||| |||
Sbjct: 685 gtgaagggtgtgctgactgcagaggatactaggctagccatccagaatggagctgctgga 744
Query: 681 atcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactattatggct 740
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atcatcgtctccaatcatggagctcgccagcttgattatgttcctgcaactattatggcc 804
Query: 741 ttggaagaggttgtgaaagctgcacaaggcagagttcctgttttccttgatggtggagtt 800
|||||||||||||| |||||||| |||||| ||||||| ||||| |||||||||||||||
Sbjct: 805 ttggaagaggttgtcaaagctgctcaaggccgagttccagtttttcttgatggtggagtt 864
Query: 801 cgccgcggaacagatgttttcaaggcattggcactaggagcatctggaatattt 854
|| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 865 cgtcgtggaacagatgttttcaaggcattggctctaggagcatctggaatattt 918
>29727.m000485 (S)-2-hydroxy-acid oxidase, putative
Length = 441
Score = 73.8 bits (37), Expect = 2e-12
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 674 tgcaggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactat 733
||||||||| || ||||||||||| |||||||||||||| |||||| |||||| |||||
Sbjct: 99 tgcaggaattattgtctccaatcatggagctcgccagctagattatactcctgccactat 158
Query: 734 tatggctttggaagaggttgt 754
| ||| |||||||||||||
Sbjct: 159 ttcagctctggaagaggttgt 179
>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 67.9 bits (34), Expect = 1e-10
Identities = 130/162 (80%)
Strand = Plus / Plus
Query: 674 tgcaggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactat 733
||||||||| || |||||||| ||||||||||||||||| |||||| ||||| |||||
Sbjct: 735 tgcaggaattattgtctccaaccacggagctcgccagctagattatacacctgccactat 794
Query: 734 tatggctttggaagaggttgtgaaagctgcacaaggcagagttcctgttttccttgatgg 793
| | ||||| |||||||| |||||| || | |||||| ||| ||||||||||
Sbjct: 795 ttctgtcttggaggaggttgttcaagctgttggagagaaagttccagttctccttgatgg 854
Query: 794 tggagttcgccgcggaacagatgttttcaaggcattggcact 835
||| |||| || ||||| ||||| ||||||||||| |||||
Sbjct: 855 aggaattcggcggggaactgatgtgttcaaggcattagcact 896
>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 67.9 bits (34), Expect = 1e-10
Identities = 130/162 (80%)
Strand = Plus / Plus
Query: 674 tgcaggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactat 733
|||||| || || ||||| ||||| |||||||| ||||| || ||| |||||| |||||
Sbjct: 735 tgcagggattattgtctctaatcatggagctcgacagctagactattctcctgccactat 794
Query: 734 tatggctttggaagaggttgtgaaagctgcacaaggcagagttcctgttttccttgatgg 793
| ||||||||||||||||| | |||| ||| | | |||| ||| ||||||||||
Sbjct: 795 ttctgctttggaagaggttgttcatgctgttggagggaaaattccagttctccttgatgg 854
Query: 794 tggagttcgccgcggaacagatgttttcaaggcattggcact 835
||||| || || ||||| ||||| |||||||||||||||||
Sbjct: 855 aggagtgcggcgaggaactgatgtattcaaggcattggcact 896
>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
Length = 903
Score = 61.9 bits (31), Expect = 6e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 676 caggaatcatcgtctccaatcacggagctcgccagcttgattatgttcctgcaactatta 735
||||||| || ||||||||||| |||||||||||||| ||||| |||||| ||||||
Sbjct: 605 caggaattattgtctccaatcatggagctcgccagctagattacactcctgccactattt 664
Query: 736 tggctttggaagaggttgt 754
||| |||||||||||||
Sbjct: 665 ctgctctggaagaggttgt 683