Jatropha Genome Database
- JcCB0085061.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0085061.30 - phase: 1 /partial
(485 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29727.m000487 (S)-2-hydroxy-acid oxidase, putative 343 6e-94
29727.m000481 (S)-2-hydroxy-acid oxidase, putative 90 1e-17
29727.m000486 (S)-2-hydroxy-acid oxidase, putative 66 2e-10
>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 343 bits (173), Expect = 6e-94
Identities = 242/265 (91%)
Strand = Plus / Plus
Query: 135 cataagtttgcaaaccctgaaggtgaggttgccacagccagagctgcagctgcatgtaac 194
|||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 247 cataagcttgcaaatcctgaaggtgaggctgccacagccagagctgcagctgtatgcaac 306
Query: 195 agtattatgattttatcatacatgtcttcctgcacagtggaggaggttgcttccagctgc 254
| |||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 307 acaattatggttttatcctatatgtcttcctgcacagtggaggaggttgcttccagttgc 366
Query: 255 aatgccattcggttctatcaattatatgtgtacaagagacgagatatatcagctcatcta 314
||||| ||||| ||||||||||||||||| ||||| || |||||||||||||| || |||
Sbjct: 367 aatgctattcgattctatcaattatatgtctacaaaaggcgagatatatcagcccagcta 426
Query: 315 gtgcagagagctgaaagaaatggatataaggctattgtcttgactgtggatgctcctaga 374
||||||||||||||||||||||| || |||||||||||| | |||||||||||||| |||
Sbjct: 427 gtgcagagagctgaaagaaatggttacaaggctattgtcctaactgtggatgctcccaga 486
Query: 375 cttggtagaagagaggcagacatta 399
|||||||||||||||||||||||||
Sbjct: 487 cttggtagaagagaggcagacatta 511
>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 232 tggaggaggttgcttccagctgcaatgccattcggttctatcaattatatgtgtacaaga 291
|||||||||||||| | || |||||||| |||| |||| |||||||||||| || || |
Sbjct: 344 tggaggaggttgctgctagttgcaatgctgttcgtttctttcaattatatgtatataaaa 403
Query: 292 gacgagatatatcagctcatctagtgcagagagctgaaagaaatggatataaggctattg 351
|||| ||||| | ||| | ||||||||||||||||||| ||||| |||||||||||||
Sbjct: 404 gacgcgatatcgctgctaaattagtgcagagagctgaaaggaatggttataaggctattg 463
Query: 352 t 352
|
Sbjct: 464 t 464
>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
Length = 1095
Score = 65.9 bits (33), Expect = 2e-10
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 235 aggaggttgcttccagctgcaatgccattcggttctatcaattatatgtgtacaagagac 294
||||||||||| | ||||||||||| | ||||||| ||||||||||||||| || ||||
Sbjct: 347 aggaggttgctgctagctgcaatgctgtccggttctttcaattatatgtgtataaaagac 406
Query: 295 gagatatatcagctcatctagtgcagagagctgaaagaaatggatataa 343
| ||||| | || ||||||||||||||||| | |||||||||||
Sbjct: 407 gtgatatggctactatattagtgcagagagctgaatgcaatggatataa 455