Jatropha Genome Database

JcCB0084921.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0084921.20 - phase: 0 
         (792 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29980.m000180 conserved hypothetical protein                          262   3e-69

>29980.m000180 conserved hypothetical protein
          Length = 906

 Score =  262 bits (132), Expect = 3e-69
 Identities = 362/438 (82%), Gaps = 3/438 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtacgtgacaagacctctttctttgtacagaaaattcccaagtgccctttcagaagaa 60
           ||||| |||||||| |||||||| ||||| || || | ||||||||||||||||| ||| 
Sbjct: 1   atgtatgtgacaaggcctctttccttgtataggaactgcccaagtgccctttcagcagac 60

                                                                       
Query: 61  ccaccagaaggtccatactcaggctatttagtaattacagatgaagaaactgaagcagaa 120
           |||||||||||||||||| |||||||| | |||||||||||||||||| |||| ||| | 
Sbjct: 61  ccaccagaaggtccatacacaggctatctggtaattacagatgaagaagctgaggcacat 120

                                                                       
Query: 121 aatactttctgttttggattttgtaaaaagacgagagttggaaagctaccatttcctcaa 180
            |||| |  ||||||||   |||||| || |  || |||  |||||| || |||||||||
Sbjct: 121 gatacatattgttttggtgcttgtaagaaaaaaagggttcaaaagcttccttttcctcaa 180

                                                                       
Query: 181 gacaagatattaaatgttgttcatttatctgagaatcaagaaactactgctaagaaattc 240
           |||||||| |||||||| |||||||| |||||  || |||| |||   | ||||||| | 
Sbjct: 181 gacaagatcttaaatgtagttcatttttctgactataaagagactttagttaagaaagtt 240

                                                                       
Query: 241 tggtttgttcctgttcttggtcagcttttatcttctaattgctactatgtcatcaaagcg 300
           |||||| | || || |||| ||||  | |||||||||||||||||||||||||||| || 
Sbjct: 241 tggtttctcccagtacttgatcagtctctatcttctaattgctactatgtcatcaaggct 300

                                                                       
Query: 301 aaaggcagacataaaggacaagcatgcagatgctcaagggacatggacatggggttacta 360
           |||||||||   ||||| ||||||||||  ||||| ||||| |||||||||||   | ||
Sbjct: 301 aaaggcagattcaaagggcaagcatgcacgtgctccagggatatggacatggg---atta 357

                                                                       
Query: 361 tgttgcttcaagaaagtcataaaagacataagaccaagaccattagatccaagaaacaca 420
           |||||||| |||||||| ||||| ||||| | ||||| |||||||||||||||||||| |
Sbjct: 358 tgttgctttaagaaagtgataaatgacatcaaaccaaaaccattagatccaagaaacata 417

                             
Query: 421 taccaagaattcaagatt 438
           |||||  |||||||||||
Sbjct: 418 taccagaaattcaagatt 435