Jatropha Genome Database
- JcCB0084431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0084431.10 + phase: 0 /partial
(1138 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004751 conserved hypothetical protein 228 6e-59
29633.m000897 conserved hypothetical protein 60 3e-08
>29929.m004751 conserved hypothetical protein
Length = 1446
Score = 228 bits (115), Expect = 6e-59
Identities = 160/175 (91%)
Strand = Plus / Plus
Query: 1 atgtcggaaactttagcttgggaaaagtggtcaactttctctcacaatcgctatttggaa 60
||||| ||| ||||||| |||||||| |||||||| ||||||||||| | || || |||
Sbjct: 64 atgtcagaatctttagcctgggaaaaatggtcaaccttctctcacaacagatacttagaa 123
Query: 61 gaagttgagcagttttccaagccaggttctgttgctcagaagaaggcttattttgaagct 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 124 gaagttgagcagttttccaagccaggttctgttgctcagaagaaagcttattttgaagct 183
Query: 121 cattacaagcagagagctgcaatgaaagcagcagccttgcttgagcaagcaaata 175
||||| ||| |||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 184 cattataagaagagagctgccatgaaagcagcagcctcgcttgagcaagcaaata 238
Score = 180 bits (91), Expect = 1e-44
Identities = 338/417 (81%), Gaps = 5/417 (1%)
Strand = Plus / Plus
Query: 722 tacctagtaataaaagacaaatgaattcgtcatcaaaatcttcaagtcagagtagagctt 781
|||| |||||||||||||||||||||| ||||||||||| |||| |||| |||||||||
Sbjct: 632 taccaagtaataaaagacaaatgaatttgtcatcaaaattatcaaatcagggtagagctt 691
Query: 782 ctaaagtcccgaagccttctatcaaacaggttaattccacacagctgaagggtggaacaa 841
| ||| |||| ||| |||||| ||| ||| | |||| |||||||||| |||| |||||
Sbjct: 692 ccaaactcccaaagtcttctaccaagcagcccagttccgcacagctgaaaggtgcaacaa 751
Query: 842 atgtcaatccaagcaaaaagaaatctctggaagagttgatcgatagaaagagattaaatg 901
|||| |||||| || ||||| || | | ||| |||| || |||||||||||| |
Sbjct: 752 atgttcatccaaacagtaagaagtccttaggagacatgattgacagaaagagattagctc 811
Query: 902 caaaacctgtccacatgtcgattaatttgcctcctagcacaagagaaacgagcaaaagtt 961
||||| |||| || ||||| || |||||| ||||| || | ||||||| || |||||||
Sbjct: 812 caaaatctgttcatatgtcaatcaatttggctcctcgctctggagaaaccagtaaaagtt 871
Query: 962 ctaccagaatgtcaaaagagagttcagctacgccacaaaattcaacaagggcatctgttt 1021
|| |||||||||| |||||||||||| | || ||| ||||| ||| ||||||||||||
Sbjct: 872 ctgccagaatgtcgaaagagagttcaacaacaccaaaaaatccaa---gggcatctgttt 928
Query: 1022 atgggatatcaaagcttcttccttcaataaatcgccagtcagaagatagaagaagtcagt 1081
||||||||||||||||||| |||||||||| || |||||||| | ||||| | ||
Sbjct: 929 ttgggatatcaaagcttctttcttcaataaaccggtcatcagaagagaaaagaacccggt 988
Query: 1082 ctctactcaataaatcagtttctggtaggaagaatagccggcgggatagttgcaggc 1138
| | |||||||| ||||||||||| |||| |||||| ||||||||| ||||||||
Sbjct: 989 catttctcaataagtcagtttctgg-cggaacaatagcaggcgggata-ttgcaggc 1043
Score = 52.0 bits (26), Expect = 7e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 538 gaaaatccaaagcagcttgataatgctgaggaatctgacaagattttggc 587
|||||| |||||||||||||||||||| | || | |||||||||| ||||
Sbjct: 526 gaaaattcaaagcagcttgataatgctaatgactttgacaagattgtggc 575
>29633.m000897 conserved hypothetical protein
Length = 1632
Score = 60.0 bits (30), Expect = 3e-08
Identities = 138/174 (79%)
Strand = Plus / Plus
Query: 1 atgtcggaaactttagcttgggaaaagtggtcaactttctctcacaatcgctatttggaa 60
||||| ||| ||||||||||||| || |||||| | ||||||||||| || ||| |||||
Sbjct: 124 atgtcagaatctttagcttgggagaaatggtcatccttctctcacaaccgatatgtggaa 183
Query: 61 gaagttgagcagttttccaagccaggttctgttgctcagaagaaggcttattttgaagct 120
|| | |||| || || || || || |||||||||||||| |||| ||||||||
Sbjct: 184 gaggctgagagattctctcgtcctggatcggttgctcagaagaaagctttctttgaagca 243
Query: 121 cattacaagcagagagctgcaatgaaagcagcagccttgcttgagcaagcaaat 174
||||||||| | ||||||| || || ||||| ||||||||||||||||||
Sbjct: 244 cattacaagaatcttgctgcaagaaaggctgcagctttgcttgagcaagcaaat 297