Jatropha Genome Database

JcCB0083701.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0083701.20 - phase: 2 /pseudo/partial
         (523 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29980.m000173 mannose-6-phosphate isomerase, putative                 155   3e-37

>29980.m000173 mannose-6-phosphate isomerase, putative
          Length = 1125

 Score =  155 bits (78), Expect = 3e-37
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                       
Query: 257 tatggcgagtgcattgaatgcatggcaacatcagacaatgttgtgcgggctggccttact 316
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 700 tatggcgagtgcattgaatgcatggcaacatcagataatgttgtgcgggctggccttact 759

                                                             
Query: 317 cccaaacatcgggacatccaaactctatgttctatgctaacatacaaaca 366
           || || ||||||||  |||||||||| ||||| ||||| |||||||||||
Sbjct: 760 cctaagcatcgggatgtccaaactctttgttcaatgcttacatacaaaca 809



 Score =  129 bits (65), Expect = 2e-29
 Identities = 159/189 (84%), Gaps = 1/189 (0%)
 Strand = Plus / Plus

                                                                       
Query: 60  ttcctgaaattgtagaactggttggcagtgcagatgcaagccgagtcttacttctgaatg 119
           ||||||| ||||||||||||||||||| |||||||||||  | |||||||| | | ||||
Sbjct: 356 ttcctgagattgtagaactggttggcactgcagatgcaaaacaagtcttacatgtaaatg 415

                                                                       
Query: 120 aacaggatgcaaaggaggtaagtaaaatcaattctgaaatcaatttttacccaactcatg 179
           | |||||||   ||||   ||||||||||| || ||| |||||| |||||||||||||||
Sbjct: 416 agcaggatggggaggaaa-aagtaaaatcagttgtgagatcaatatttacccaactcatg 474

                                                                       
Query: 180 tcagctagcaaagacatgacaactaaagtaataacgaaattgaaaacccgattacatatg 239
           |||||||||||||| |||| |||  |||| ||| | ||||||||||  ||||| || |||
Sbjct: 475 tcagctagcaaagagatgataacagaagtgatatctaaattgaaaattcgattgcacatg 534

                    
Query: 240 gaaagccag 248
           |||||||||
Sbjct: 535 gaaagccag 543



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                        
Query: 415  tgaaggagatgtcctgttcgcacctgccaacacagaggttactataacaaccacatctga 474
            |||||| || ||||| || |||||||||||||  ||| ||| | |||||||  |||||||
Sbjct: 1014 tgaaggggacgtcctatttgcacctgccaacatcgagattaatgtaacaacttcatctga 1073

                                                       
Query: 475  gctgtgcctgtatagagcaggagtgaacagcaggttcttccaa 517
            |||  |  ||||||| || |||||||| |||||||||||||||
Sbjct: 1074 gctacgtttgtatagggctggagtgaatagcaggttcttccaa 1116