Jatropha Genome Database
- JcCB0083701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0083701.10 + phase: 2 /partial
(544 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29980.m000174 40S ribosomal protein S7, putative 549 e-156
29996.m000136 40S ribosomal protein S7, putative 159 2e-38
>29980.m000174 40S ribosomal protein S7, putative
Length = 576
Score = 549 bits (277), Expect = e-156
Identities = 481/545 (88%), Gaps = 3/545 (0%)
Strand = Plus / Plus
Query: 1 gacaaggatgctgaaccaactgaatttgaggagtcagttgctcaggcccctgtttgatct 60
||||||||||||||||| ||||||||||||||| ||||||| ||||| | ||||||||
Sbjct: 31 gacaaggatgctgaacccactgaatttgaggagacagttgcacaggcaa-tatttgatct 89
Query: 61 cgaaaataccaacccagaactgaaaagtgatttaaaagatctcttcataaa-tcaggcag 119
|||||||||| || || |||| |||||| |||||||||||||||| || |||| |||
Sbjct: 90 tgaaaataccagccaggacttgaagagtgatctaaaagatctcttcattaactcag-cag 148
Query: 120 ttcaaatggatgtttctggaaatcggaaagctgttgttatttatgttccctacagattga 179
|||||||||||||| |||| ||||| || |||||||||||||||||||| ||||||||||
Sbjct: 149 ttcaaatggatgttgctgggaatcgcaaggctgttgttatttatgttccttacagattga 208
Query: 180 ggaaggcctaccgcaagattcatcttcgtcttgttagagagttggagaaaaagttcagcg 239
||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 209 ggaaggcttaccgcaagattcatcttcgccttgttagggagttggagaagaagttcagtg 268
Query: 240 gaaaggacgttgtcctcattgccacccggaggatcgtgcgcccaccgaagaagggttctg 299
| ||||| |||||||| |||||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 269 ggaaggatgttgtcctggttgccaccagaaggatcgtgcgtccaccgaagaaaggttctg 328
Query: 300 ctgttcagcgccctcgttcccgaacccttacatctgtgcatgatgccatgcttgaggatg 359
|||| ||||| ||||| | || ||||| ||| |||||||||||||||||||||||||||
Sbjct: 329 ctgtgcagcgacctcgcacacgcaccctgacagctgtgcatgatgccatgcttgaggatg 388
Query: 360 tagtgtatcccgctgagattgttggaaaacgcatcagatacagaatcgatgggtccaaaa 419
|||| ||||| |||||||||||||| ||||||| |||||||||||| || || |||||||
Sbjct: 389 tagtttatccagctgagattgttgggaaacgcaccagatacagaatagacggttccaaaa 448
Query: 420 ttatcaagattttcttggatcccaaagagcgcaacaacactgagtacaagttggagacat 479
||| |||||||||||||||||||| ||||| | |||||| |||||||| ||||| ||||
Sbjct: 449 ctatgaagattttcttggatcccaaggagcggatcaacaccgagtacaaattggaaacat 508
Query: 480 ttgctggagtttacaggaagcttactgggaaagatgtggtttttgagtatcctataacag 539
|| |||||||||||||||||||||||||||||||||| |||||||| || || |||||||
Sbjct: 509 ttactggagtttacaggaagcttactgggaaagatgtagtttttgaataccccataacag 568
Query: 540 aggct 544
|||||
Sbjct: 569 aggct 573
>29996.m000136 40S ribosomal protein S7, putative
Length = 576
Score = 159 bits (80), Expect = 2e-38
Identities = 408/516 (79%), Gaps = 1/516 (0%)
Strand = Plus / Plus
Query: 4 aaggatgctgaaccaactgaatttgaggagtcagttgctcaggcccctgtttgatctcga 63
|||||||||||||| | ||||| |||||||| ||||| ||||| | | || ||||| ||
Sbjct: 34 aaggatgctgaacctagcgaattcgaggagtctgttgcacaggcac-tcttcgatctgga 92
Query: 64 aaataccaacccagaactgaaaagtgatttaaaagatctcttcataaatcaggcagttca 123
|||||||||| |||| ||||| |||| | || ||||||| |||||| ||||||||
Sbjct: 93 aaataccaactcagagttgaaatctgatatgaaggatctctatataaattcagcagttca 152
Query: 124 aatggatgtttctggaaatcggaaagctgttgttatttatgttccctacagattgaggaa 183
||| |||||| |||| ||| |||| ||||||||||| ||||||| |||||| |||||||
Sbjct: 153 aattgatgttgctgggaataggaaggctgttgttatccatgttccttacagactgaggaa 212
Query: 184 ggcctaccgcaagattcatcttcgtcttgttagagagttggagaaaaagttcagcggaaa 243
|| ||| | |||||||| | | ||||| ||||| | ||||| |||||||| || ||
Sbjct: 213 agcttacaggaagattcacgtcaggcttgtcagagaacttgagaagaagttcagtgggaa 272
Query: 244 ggacgttgtcctcattgccacccggaggatcgtgcgcccaccgaagaagggttctgctgt 303
||| || |||| ||||||||||||||||| || | || || ||||| ||||| |||||
Sbjct: 273 ggatgtaatcctgattgccacccggaggatagtaaggcccccaaagaaaggttcagctgt 332
Query: 304 tcagcgccctcgttcccgaacccttacatctgtgcatgatgccatgcttgaggatgtagt 363
||| | ||||| |||| || ||||| |||| ||||| || ||||| |||||| | ||
Sbjct: 333 tcaaaggcctcgcacccgcacacttactgctgtccatgaggcaatgctcgaggatattgt 392
Query: 364 gtatcccgctgagattgttggaaaacgcatcagatacagaatcgatgggtccaaaattat 423
| || ||||| |||||||| || || | |||||| |||| ||||| ||||| || ||
Sbjct: 393 attgcctgctgaaattgttggcaagcggaccagatatcgaattgatggatccaagataat 452
Query: 424 caagattttcttggatcccaaagagcgcaacaacactgagtacaagttggagacatttgc 483
||| |||||||||| || || ||||| |||||||| || |||||| ||||||||||| |
Sbjct: 453 gaaggttttcttggacccaaaggagcgaaacaacacagaatacaagctggagacattttc 512
Query: 484 tggagtttacaggaagcttactgggaaagatgtggt 519
| |||||| |||||||| | || |||||||||||
Sbjct: 513 cgcagtttatcggaagctttcaggcaaagatgtggt 548