Jatropha Genome Database
- JcCB0082241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0082241.10 + phase: 0 /pseudo/partial
(729 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014183 ER lumen protein retaining receptor, putative 482 e-135
29711.m000331 ER lumen protein retaining receptor, putative 250 1e-65
30120.m000373 ER lumen protein retaining receptor, putative 66 3e-10
>30170.m014183 ER lumen protein retaining receptor, putative
Length = 666
Score = 482 bits (243), Expect = e-135
Identities = 375/419 (89%)
Strand = Plus / Plus
Query: 142 tcactgaaatcacaggagttgacggctctatttctagctgttagactctattgcagtttt 201
|||||||||||||||||| |||| ||| | ||| |||||| ||||||||| ||||| |||
Sbjct: 229 tcactgaaatcacaggagctgacagctatctttttagctgctagactctactgcagcttt 288
Query: 202 gtcatggaatatgacatacatacactacttgattcagctacattgcttacaactctatgg 261
|||||||||||||||||||| |||||||||||||| || ||| |||| ||||| ||||||
Sbjct: 289 gtcatggaatatgacatacacacactacttgattcggccacactgctgacaaccctatgg 348
Query: 262 gtgatttatatgattcgcttcaaattgaggtccagttacatggatgacaaagacaacttt 321
|| ||||||| || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 349 gttatttatactatccgcttcaaattaagatccagttacatggatgacaaagacaacttt 408
Query: 322 gcaatctactatgtggtgataccttgtgccgtgctatctttccttattcacccgtcaaca 381
||||| |||||||| ||||||||||||| ||||||||||| ||||||| || ||||
Sbjct: 409 gcaatatactatgtcttgataccttgtgctgtgctatctttgattattcatccaacaacg 468
Query: 382 catcatcatatattgaacaggatttgctgggctttctgtgtttatctggaagctgtttca 441
|| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 469 cagcatcatatatttaataggatttgctgggctttctgtgtttatcttgaagctgtttca 528
Query: 442 gtattgcctcagcttcgggtcatgcagaacacaaagattgttgaacctttcacagcacat 501
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 529 gtgttgcctcagcttcgtgtcatgcagaacacaaagattgttgaacccttcacggcacat 588
Query: 502 tatgtatttgcactcggagtagcgagattcttgaattgtgcacattgggtgctgcaggt 560
|||||||||||||| ||||| || || ||||||| |||||||||||||||||| |||||
Sbjct: 589 tatgtatttgcacttggagttgcaaggttcttgagttgtgcacattgggtgcttcaggt 647
>29711.m000331 ER lumen protein retaining receptor, putative
Length = 819
Score = 250 bits (126), Expect = 1e-65
Identities = 477/594 (80%)
Strand = Plus / Plus
Query: 136 ggactttcactgaaatcacaggagttgacggctctatttctagctgttagactctattgc 195
||||| ||||| || || ||||| ||||| ||| | ||| |||||||||| || ||||||
Sbjct: 223 ggactatcacttaagtctcaggaattgacagctatgtttttagctgttaggctgtattgc 282
Query: 196 agttttgtcatggaatatgacatacatacactacttgattcagctacattgcttacaact 255
|| ||||| ||||||||||| |||||||| || ||||||| |||||||||| || |||
Sbjct: 283 agctttgttatggaatatgatatacataccctgcttgatttagctacattgggaacgact 342
Query: 256 ctatgggtgatttatatgattcgcttcaaattgaggtccagttacatggatgacaaagac 315
| ||||| ||||||||||| || ||||| |||| ||| ||||||||||| |||||||||
Sbjct: 343 ttgtgggttatttatatgatccgtttcaatttgaagtctagttacatggaggacaaagac 402
Query: 316 aactttgcaatctactatgtggtgataccttgtgccgtgctatctttccttattcacccg 375
|| |||||||| || ||||||||| |||| |||||| | ||| |||| | ||||| ||
Sbjct: 403 aattttgcaatatattatgtggtggtaccctgtgccattctagctttgttaattcatcca 462
Query: 376 tcaacacatcatcatatattgaacaggatttgctgggctttctgtgtttatctggaagct 435
|||||| |||| |||| |||| ||||||| |||||| |||||||| || |||||||||
Sbjct: 463 tcaacatctcataatattgtgaataggattttctgggcattctgtgtatacctggaagct 522
Query: 436 gtttcagtattgcctcagcttcgggtcatgcagaacacaaagattgttgaacctttcaca 495
||||| || || |||||| | || || ||||| || |||||||| ||||| || || |||
Sbjct: 523 gtttctgtgttacctcagttgcgtgtaatgcaaaatacaaagatagttgagccatttaca 582
Query: 496 gcacattatgtatttgcactcggagtagcgagattcttgaattgtgcacattgggtgctg 555
|| ||||||||||||||| | || || ||||| ||||||| |||||| || ||||| ||
Sbjct: 583 gctcattatgtatttgcattgggtgttgcgaggttcttgagttgtgcccactgggttctt 642
Query: 556 caggtgttggatactcgaggacgccttctgacagcactaggctatggattgtggcctcca 615
||||| ||||| ||||| |||| | | ||| ||| | || ||||||||||||||| |
Sbjct: 643 caggttttggacactcgtggacacttgctggtagccttgggttatggattgtggccttct 702
Query: 616 atggtcctcctttcagaggtcgtccagacattcattcttgctgatttttgctattactat 675
||||| || | ||||| | || ||||| ||||| | ||||| || || || || |||
Sbjct: 703 atggttcttatatcagaaattgttcagactttcatcttagctgacttctgttactattat 762
Query: 676 gtcaagagtctggtcggtggacagcttgttctacgtcttccatcgggagtggtg 729
||||| ||| | | || |||||||||||||| |||||||| || |||||||||
Sbjct: 763 gtcaaaagtgtttttggaggacagcttgttctccgtcttccctcaggagtggtg 816
>30120.m000373 ER lumen protein retaining receptor, putative
Length = 768
Score = 65.9 bits (33), Expect = 3e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 409 tgggctttctgtgtttatctggaagctgtttcagtattgcctcagcttcgggtcatgcag 468
|||||||| ||||| ||| ||||| |||| || || ||||||||||||| ||||||||
Sbjct: 451 tgggctttttgtgtgtatttggaatctgtctcggtgctgcctcagcttcgcctcatgcag 510
Query: 469 aacacaaagattgttgaacctttcacagcacattatgtatttgca 513
||| ||||||| |||| || || ||| | |||||||||||||||
Sbjct: 511 aacgcaaagatgattgagccctttacatctcattatgtatttgca 555