Jatropha Genome Database

JcCB0079761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0079761.10 + phase: 2 /pseudo/partial
         (497 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30073.m002313 origin recognition complex subunit, putative            287   3e-77

>30073.m002313 origin recognition complex subunit, putative
          Length = 2148

 Score =  287 bits (145), Expect = 3e-77
 Identities = 316/373 (84%)
 Strand = Plus / Plus

                                                                        
Query: 9    tgcagcccattgagagcatagctttccatgagattgtttgctttaagcatgttgaacaac 68
            |||||||  ||||| ||||| |||||||||| ||| | |||||||||  ||||||  | |
Sbjct: 1643 tgcagcctgttgagtgcatacctttccatgaaattatctgctttaagagtgttgacaacc 1702

                                                                        
Query: 69   ttcaagtggctttaattggagacccgaggaaaaggattcaagttgatcttcttgaattcc 128
            |||||| ||| ||| ||||| ||||||| | |||||||||||||||||| || |||||||
Sbjct: 1703 ttcaagcggcgttacttggacacccgagaagaaggattcaagttgatctcctggaattcc 1762

                                                                        
Query: 129  ataatatcatccggtgcagttgttgcagcaggagtggcaattctttgttgccatccatga 188
            ||||||||||||  |||||||| ||| ||||||||||||||    || |||||||| || 
Sbjct: 1763 ataatatcatccattgcagttgctgccgcaggagtggcaatagcctgctgccatccgtgc 1822

                                                                        
Query: 189  acgattcctcaattatgtattccctagctcgagagcaggacgatcttattaatctccatg 248
            | ||||||||||||||||||  | ||||||  ||||| |  |||||| |||||||||| |
Sbjct: 1823 atgattcctcaattatgtatagcttagctcaggagcatggggatcttgttaatctccacg 1882

                                                                        
Query: 249  actggtatcaatctttcaagttggtaattcttagctctagcaataaagggaaacatcgga 308
            ||||||| || ||||||||||  ||||||||||||||||| |||||||| ||||| ||| 
Sbjct: 1883 actggtaccagtctttcaagtcagtaattcttagctctagtaataaaggtaaacaccggt 1942

                                                                        
Query: 309  cgaagcattttccatcaccaaagaaaaggaaagttgcaactgaagctgcaaagccaactg 368
            ||||||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||  |
Sbjct: 1943 cgaagcattctccatcaccaaagaaaaggaaagttacaactgaaactgcaaaaccaagcg 2002

                         
Query: 369  aagaatcaattca 381
            ||| |||||||||
Sbjct: 2003 aagcatcaattca 2015