Jatropha Genome Database

JcCB0079621.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0079621.20 - phase: 0 /pseudo/partial
         (621 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29682.m000578 auxin:hydrogen symporter, putative                       60   2e-08

>29682.m000578 auxin:hydrogen symporter, putative
          Length = 1254

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 439  gatcctttgtatcaatttgttcttctgctgcagtttgcagttccacctgctatgaacata 498
            ||||| ||||| || ||| | |||||| |||| |||||||||||||| ||||||||||||
Sbjct: 1069 gatccattgtaccagtttatccttctggtgcaatttgcagttccaccagctatgaacata 1128

              
Query: 499  gg 500
            ||
Sbjct: 1129 gg 1130