Jatropha Genome Database
- JcCB0078701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0078701.10 - phase: 0
(738 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003535 Transcriptional factor TINY, putative 226 1e-58
30174.m008790 Transcriptional factor TINY, putative 70 2e-11
29794.m003381 Transcriptional factor TINY, putative 66 3e-10
28353.m000054 DNA binding protein, putative 62 5e-09
>30146.m003535 Transcriptional factor TINY, putative
Length = 726
Score = 226 bits (114), Expect = 1e-58
Identities = 234/274 (85%)
Strand = Plus / Plus
Query: 155 gtagcaaacacccagtctatagaggcgttaggatgcgaagttggggtaaatgggtatcgg 214
||||||| |||||||| || ||||| ||||| ||| |||||||||||||||||||||| |
Sbjct: 128 gtagcaagcacccagtttacagaggtgttagaatgagaagttggggtaaatgggtatccg 187
Query: 215 aaatccgtgaaccgagaaagaaatcacgtatttggcttgggacattccccacggcggaaa 274
||||||| |||||| | || |||||| | |||||| | || |||||||| || || ||||
Sbjct: 188 aaatccgcgaaccgcgtaaaaaatcaagaatttggttaggaacattccctaccgctgaaa 247
Query: 275 tggcggcccgtgctcatgatgtcgccgctatgagtattaaaggtaatgctgccattctta 334
||||||| ||||| |||||||| ||||| ||||| |||||||||||| |||||||||| |
Sbjct: 248 tggcggcgcgtgcacatgatgttgccgccatgagcattaaaggtaattctgccattctaa 307
Query: 335 attttccagaaatcgttgactcactgcctcggccagtttcattaatgccgcgagatattc 394
| |||||| | | |||||||||| ||||| ||||||||||||||||| || || ||||
Sbjct: 308 actttccacagcttattgactcacttcctcgtccagtttcattaatgccacgcgacattc 367
Query: 395 aagcagccgccgccaaagctgcttcaatggttga 428
||| |||||| || ||||||||||||||||||||
Sbjct: 368 aagtagccgctgctaaagctgcttcaatggttga 401
Score = 172 bits (87), Expect = 2e-42
Identities = 200/235 (85%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 505 gtgtctgtgtccgatgatgtttcagaatctgaagaattgagtgaaattgtcgagttgccg 564
||||| |||||||| |||||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 493 gtgtcagtgtccgaggatgtttcagaatccgaggaattaagtgaaatcgtggagttgcca 552
Query: 565 aatatagaagggagttttgactcggc-cgaatccgtgactgagtttatattgtttgattc 623
|||||||||||||||||||| | ||| | | | || | ||||||||||||| |||||||
Sbjct: 553 aatatagaagggagttttgagttggcaccactaagt-agtgagtttatattgattgattc 611
Query: 624 cgttgatgggtgggtttatccaccaccgcaggacatgtgtggagaattttctgatcagtt 683
||||| ||||||||||||||||||| | | |||| |||||||||||||||||||||||
Sbjct: 612 tgttgacgggtgggtttatccaccacaggacaacatttgtggagaattttctgatcagtt 671
Query: 684 aatgggattagaaagtctgatttccagcaactttggagcttcggtttgggattaa 738
| || ||||| ||| |||||||||| ||||||||| |||| | ||||||||||
Sbjct: 672 atcagggttagagagtttgatttccagtaactttggaacttcaggttgggattaa 726
>30174.m008790 Transcriptional factor TINY, putative
Length = 831
Score = 69.9 bits (35), Expect = 2e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 172 tatagaggcgttaggatgcgaagttggggtaaatgggtatcggaaatccgtgaaccgaga 231
|||||||| || || ||| |||||||||||||||||||||| |||||| | ||||| ||
Sbjct: 277 tatagaggagtaagaatgagaagttggggtaaatgggtatctgaaatcagagaaccaagg 336
Query: 232 aagaaatcacgtatttggcttgg 254
||||||||| | || ||||||||
Sbjct: 337 aagaaatcaagaatatggcttgg 359
>29794.m003381 Transcriptional factor TINY, putative
Length = 813
Score = 65.9 bits (33), Expect = 3e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 159 caaacacccagtctatagaggcgttaggatgcgaagttggggtaaatgggtatcggaaat 218
|||||||||||| ||| | |||||| | ||||| | ||||| |||||||| || |||||
Sbjct: 144 caaacacccagtgtatcgtggcgttcgcatgcggaactgggggaaatgggtctcagaaat 203
Query: 219 ccgtgaaccgagaaagaaatcacgtatttggcttgggacattccc 263
||||||||| | |||||||| || ||||||||||| || |||||
Sbjct: 204 ccgtgaaccacgcaagaaatcccgcatttggcttggtactttccc 248
>28353.m000054 DNA binding protein, putative
Length = 663
Score = 61.9 bits (31), Expect = 5e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 196 tggggtaaatgggtatcggaaatccgtgaaccgagaaagaaatcacgtatttggcttgg 254
||||| ||||||||||| ||||| || ||||| |||||||||||| | |||||||||||
Sbjct: 247 tggggcaaatgggtatctgaaattcgagaacccagaaagaaatcaagaatttggcttgg 305