Jatropha Genome Database
- JcCB0078211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0078211.10 - phase: 0 /partial
(367 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29634.m002113 sugar transporter, putative 394 e-109
30170.m014050 sugar transporter, putative 101 3e-21
30128.m008706 sugar transporter, putative 56 1e-07
30128.m008707 D-xylose-proton symporter, putative 50 9e-06
>29634.m002113 sugar transporter, putative
Length = 1461
Score = 394 bits (199), Expect = e-109
Identities = 322/363 (88%)
Strand = Plus / Plus
Query: 5 ttgctgcgattcctaatgtaattggatggttaagcatatcgtttgccaaagattcctcat 64
||||||| ||||||||| ||||||||||| |||||||||| ||||| |||||||| ||||
Sbjct: 356 ttgctgctattcctaatataattggatggctaagcatatcatttgcgaaagattcttcat 415
Query: 65 ttttattcttgggaaggttgttggaagggtttggtgttggtataatctcgtacacggtac 124
|||||||| ||||||||||||||||||| |||||||| |||||||| || ||||||||||
Sbjct: 416 ttttattcatgggaaggttgttggaaggatttggtgtcggtataatatcatacacggtac 475
Query: 125 cagtatatatagctgagatatcgcctcagaacatgagaggaagccttggatctgttaacc 184
|||||||||||||||| || | |||||||||| |||||||||||||||||| ||||| |
Sbjct: 476 cagtatatatagctgaaattgcacctcagaacaggagaggaagccttggatcagttaatc 535
Query: 185 agctttcagttactcttggaataatgttggcttatctattaggactttttatgcactgga 244
|||| || |||||||| || |||||| | || ||||| |||||||||||| | |||||||
Sbjct: 536 agctctctgttactctggggataatgctcgcatatctgttaggactttttgtacactgga 595
Query: 245 ggctgcttgcagtgttaggaattttgccctgcacaatattaatacctggcctctttttca 304
| |||||||||| |||||||||||||| |||||||| |||||||| ||| | |||||||
Sbjct: 596 gattgcttgcagttttaggaattttgccttgcacaattttaatacccggcttgtttttca 655
Query: 305 ttccagagtctcctcgatggctggccaaaatggggatgatggaagattttgaagcctctt 364
| |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||
Sbjct: 656 taccagagtctcctcgatggctggccaaaatgggaatgacagaagattttgaagcgtctt 715
Query: 365 tgc 367
|||
Sbjct: 716 tgc 718
>30170.m014050 sugar transporter, putative
Length = 1464
Score = 101 bits (51), Expect = 3e-21
Identities = 236/295 (80%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 74 tgggaaggttgttggaagggtttggtgttggtataatctcgtacacggtaccagtatata 133
||||||||||||||||||| |||||||| || || ||||| |||||||| || |||||||
Sbjct: 428 tgggaaggttgttggaaggttttggtgtaggaattatctcatacacggtgcctgtatata 487
Query: 134 tagctgagatatcgcctcagaacatgagaggaagccttggat-ctgttaaccagctttca 192
|||| || ||| | ||||| ||| ||||||| || |||| | | || || ||||| ||
Sbjct: 488 tagcagaaatagcacctcaaaacttgagaggc-gcattgggttcagtgaatcagctctct 546
Query: 193 gttactcttggaataatgttggcttatctattaggactttttatgcactggaggctgctt 252
|| || ||||||| ||| |||| ||||| | || |||||| | || ||||| | |||
Sbjct: 547 gtcacaattggaatcatgctggcctatctgcttgggctttttgttcaatggagaatactt 606
Query: 253 gcagtgttaggaattttgccctgcacaatattaatacctggcctctttttcattccagag 312
|| || || ||||| || || || || | || ||||||||||| ||||||||||| ||
Sbjct: 607 gctgtcttgggaatattaccttgtacccttttgatacctggcctgtttttcattcccgaa 666
Query: 313 tctcctcgatggctggccaaaatggggatgatggaagattttgaagcctctttgc 367
|||||||| |||||||| |||||||| |||| |||||||||||||| |||||||
Sbjct: 667 tctcctcggtggctggcaaaaatgggtatgacagaagattttgaagcttctttgc 721
>30128.m008706 sugar transporter, putative
Length = 1431
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 298 tttttcattccagagtctcctcgatggctggc 329
||||||||||||||||||||| ||||||||||
Sbjct: 622 tttttcattccagagtctcctagatggctggc 653
>30128.m008707 D-xylose-proton symporter, putative
Length = 1479
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 301 ttcattccagagtctcctcgatggctggc 329
|||||||||||||||||| ||||||||||
Sbjct: 616 ttcattccagagtctcctagatggctggc 644