Jatropha Genome Database

JcCB0078191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0078191.10 + phase: 1 /partial/short
         (104 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001208 conserved hypothetical protein                          133   2e-31

>30115.m001208 conserved hypothetical protein
          Length = 1197

 Score =  133 bits (67), Expect = 2e-31
 Identities = 95/103 (92%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    cggatcggttttcggattcacttcgaaaagccgggtggagctccgaggaagtttcggatg 60
            ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 1028 cggatcggttttcggattcacttcgaaaagctgggtggagctccgaagaagtatcggatg 1087

                                                       
Query: 61   cattaggatttgattttcgacctgagaaagaaaaggaaaccgg 103
            | ||||| |||||||||||||| || |||| ||||||||||||
Sbjct: 1088 ctttagggtttgattttcgaccgga-aaaggaaaggaaaccgg 1129