Jatropha Genome Database
- JcCB0078111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0078111.10 - phase: 0 /partial
(949 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30032.m000470 conserved hypothetical protein 801 0.0
30055.m001595 mRNA decapping enzyme 1A, putative 139 3e-32
>30032.m000470 conserved hypothetical protein
Length = 1101
Score = 801 bits (404), Expect = 0.0
Identities = 811/949 (85%)
Strand = Plus / Plus
Query: 1 atgtctcagacagggaaattgatgccgaatctggatcagcagagcactaagatgctcaat 60
|||||||| || || ||||||||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 1 atgtctcaaacgggaaaattgatgccaaatctagatcaacagagcactaagatgcttaat 60
Query: 61 ctcacagttctccagagaatcgatcccttcatcgaagagattctgatcacggcagctcat 120
||||| ||||| || ||||||||||| || || ||||||||| |||| || || ||||||
Sbjct: 61 ctcactgttcttcaaagaatcgatccttttattgaagagattttgattactgctgctcat 120
Query: 121 gtcactttctatgagttcaacatcgagagtaatcagtggagtcgaaaggacgttgaagga 180
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 121 gtcactttctatgagttcaatatcgagagtaaccagtggagtcgaaaagacgttgaagga 180
Query: 181 tctttgtttgttgtgaagaggaatacccagcccagatttcagttcatcgtaatgaatcga 240
||| | |||||||| ||||||||||| || || | |||||||| || |||||||||||
Sbjct: 181 tctctatttgttgttaagaggaatactcaaccgcggtttcagtttattgtaatgaatcgg 240
Query: 241 agaaatacagaaaacctagtggagaatctattgggagatttcgagtatgaagtccaagtg 300
||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||
Sbjct: 241 cgaaatacagaaaacctagtagagaatttattgggcgatttcgagtatgaagttcaagtt 300
Query: 301 ccttatttgttgtatagaaatgcagcccaagaagttaatggtatttggttttacaattca 360
|| ||| | || ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ccatatctattatatcgaaatgcagcccaagaagtcaatggtatttggttttacaattca 360
Query: 361 cgtgaatgtgaggaagttgccaacctatttagtaggatacttaatgcatactcaaaggtg 420
||||||||||| |||||||| || || |||| |||||||||||||||||||||||| ||
Sbjct: 361 cgtgaatgtgaagaagttgctaatctctttactaggatacttaatgcatactcaaaagtt 420
Query: 421 cccccaaagccaaaagtaccttcaagcaaaagtgaatttgaggagcttgaagcagttcca 480
|| |||||| |||| ||||| || |||||||||||||||||||| ||||||||||| |||
Sbjct: 421 cctccaaagtcaaaggtaccatcgagcaaaagtgaatttgaggaacttgaagcagtccca 480
Query: 481 agcatgtcagtgattgaaggccccttggagccctcgtcaactgcctccgctaccactgat 540
|||||||||||||||||||||||| |||| || || ||||||||||| ||| ||||||||
Sbjct: 481 agcatgtcagtgattgaaggccccctggaaccttcatcaactgcctctgctgccactgat 540
Query: 541 agtcctgaagagtcttcatttgagagtttctttaatgcgactatggttattggaagcagt 600
|||||||||| ||||| |||||||||||||||| |||| | | ||| ||||| |||
Sbjct: 541 ggtcctgaagattcttcgtttgagagtttctttactgcggccacaaatatcggaagtagt 600
Query: 601 gctgctaatttagcaaattcaagacaaccctatcattctacagccaccatcccattatcc 660
|| |||||||||||||||| |||||||| |||| |||| ||||||| |||||||||||
Sbjct: 601 gcatctaatttagcaaattctagacaaccttatccttctccagccactgtcccattatcc 660
Query: 661 acacatacacctaatgttgtttcccctccttcacacaatccacaaataccatcccttcct 720
| ||| | |||||| ||||| |||||||||||| | ||||||||||||| ||||| ||
Sbjct: 661 tcccatgctcctaatattgttctccctccttcacaaactccacaaataccaaccctttct 720
Query: 721 ctttcatctttacctccttcagtagccatccatgatgctcctgatccaatcagcagtagc 780
||||| |||| ||| |||||||| |||| | ||| |||||||||||||||||||||||
Sbjct: 721 ctttcccctttgcctgcttcagtaaccattcgtgagactcctgatccaatcagcagtagc 780
Query: 781 aatcgagttactaatcttgtgaagccctcnnnnnnnaccccaccttcttcttcatctgct 840
||||| ||||||||||||||||| ||||| | || |||||||||||||
Sbjct: 781 aatcgtgttactaatcttgtgaaaccctcttcattttttactccaccttcttcatctgca 840
Query: 841 ttgatggctccacctatctcttcacctctgcctactgctcctgctcttcatcctccctta 900
| |||||||||||||||||||| | |||||||||| || | ||||||||||| ||
Sbjct: 841 ccggtggctccacctatctcttcagccgtgcctactgcgccctcccttcatcctcctcta 900
Query: 901 aatctgcaacgcccctatggcaccccattgcttcagccctttccacctc 949
|| ||||||||||| ||||| |||||| ||||||| || ||||||||||
Sbjct: 901 aacctgcaacgcccatatggtaccccaatgcttcaaccttttccacctc 949
>30055.m001595 mRNA decapping enzyme 1A, putative
Length = 633
Score = 139 bits (70), Expect = 3e-32
Identities = 253/314 (80%)
Strand = Plus / Plus
Query: 160 agtcgaaaggacgttgaaggatctttgtttgttgtgaagaggaatacccagcccagattt 219
||||| |||||||||||||||||| | || || || ||||||||||| ||||| | |||
Sbjct: 121 agtcgcaaggacgttgaaggatctcttttcgtcgtcaagaggaatacacagcctcgtttt 180
Query: 220 cagttcatcgtaatgaatcgaagaaatacagaaaacctagtggagaatctattgggagat 279
||||| || || ||||| || | |||||||| || | || || ||||| ||||| |||
Sbjct: 181 cagtttattgtgatgaaccggcgtaatacagataatttggttgaaaatcttttgggggat 240
Query: 280 ttcgagtatgaagtccaagtgccttatttgttgtatagaaatgcagcccaagaagttaat 339
|| |||||||| |||||||| || ||| | || ||| |||||| || |||||||| |||
Sbjct: 241 tttgagtatgaggtccaagttccatatcttttatatcgaaatggtgctcaagaagtcaat 300
Query: 340 ggtatttggttttacaattcacgtgaatgtgaggaagttgccaacctatttagtaggata 399
|| |||||||| |||||| ||||||||||||| || ||||| || || ||||| ||||||
Sbjct: 301 gggatttggttctacaatgcacgtgaatgtgaagaggttgcaaatctttttagcaggata 360
Query: 400 cttaatgcatactcaaaggtgcccccaaagccaaaagtaccttcaagcaaaagtgaattt 459
||||||| ||||| |||||||| | |||| |||| ||| | ||| |||||||| |||
Sbjct: 361 attaatgcctactccaaggtgccacaaaagtcaaaggtagcaccaactaaaagtgagttt 420
Query: 460 gaggagcttgaagc 473
||||| || |||||
Sbjct: 421 gaggaactggaagc 434