Jatropha Genome Database

JcCB0077821.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0077821.10 + phase: 0 
         (1089 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008666 3-methyl-2-oxobutanoate hydroxymethyltransferase, ...   716   0.0  

>30174.m008666 3-methyl-2-oxobutanoate hydroxymethyltransferase,
            putative
          Length = 1089

 Score =  716 bits (361), Expect = 0.0
 Identities = 841/1001 (84%)
 Strand = Plus / Plus

                                                                        
Query: 61   cactgcctccgctccatgagcaatgtgccggaaaacactgtctacggcggaccaaagtcc 120
            |||||||| || | |||||||||| | ||||||||||| || |||||||| |||||| ||
Sbjct: 61   cactgcctacgttacatgagcaatataccggaaaacaccgtatacggcggtccaaagccc 120

                                                                        
Query: 121  caaaaccctaacgagagagttactctaactcaattgaagcaaaagcacaagaaaggtgag 180
            ||     | ||| ||||||| || ||||  ||  | || ||||| ||||| ||||| |||
Sbjct: 121  cagtgttccaaccagagagtaacactaagccatctcaaacaaaaacacaaaaaaggcgag 180

                                                                        
Query: 181  cccataactgtcgtcacagcctacgattatccctctgcagtgcacctcgatcaagctggc 240
            || || ||||| ||||| ||||| || ||| | || || || ||||||||   ||| || 
Sbjct: 181  ccaatcactgttgtcactgcctatgactattcttccgccgtccacctcgacacagccgga 240

                                                                        
Query: 241  attgatatttgcttagtcggagattcagccgctatggtcgttcacggtcatgataccact 300
            || || ||||| |||||||||||||| ||||| |||||||||||||| || || ||||||
Sbjct: 241  atcgacatttgtttagtcggagattccgccgccatggtcgttcacggacacgacaccact 300

                                                                        
Query: 301  ctgcctatatctctggaggagatgcttgtccattgccgtgctgttgctcgcggcgccaag 360
            |||||||| || || || || ||||||||||| |||||  | || |||||||||||||| 
Sbjct: 301  ctgcctatctcactcgatgaaatgcttgtccactgccgctccgtcgctcgcggcgccaat 360

                                                                        
Query: 361  aggccccttctcgtcggtgacttgccttttggcacctatgagtccagcaccaagcaggcg 420
            || || ||||| || ||||||||||||||||| || ||||| || ||||||| |||||| 
Sbjct: 361  agaccgcttctggttggtgacttgccttttggtacatatgaatcaagcaccatgcaggca 420

                                                                        
Query: 421  gtggatacagctgtacgggttttgaaggaaggaggaatggatgcgattaaattggaagga 480
            || |||||||| ||  | |||||||| ||||| ||||||||||| |||||| ||||||||
Sbjct: 421  gttgatacagcggttagagttttgaaagaaggcggaatggatgctattaaactggaagga 480

                                                                        
Query: 481  ggttcaccttcccgaattacagctgccaaagccatagtggaagctggaattgcagttatg 540
            || |||  |||  ||||||| ||||| ||||| || || |||||||||||||||||||||
Sbjct: 481  ggctcaagttctagaattactgctgctaaagctattgtagaagctggaattgcagttatg 540

                                                                        
Query: 541  ggtcatgtaggactcactcctcaggcaatcagtgttcttgggggattcaggcctcaagga 600
            || ||||| ||||| ||||||||||| || ||||||||||| || || || |||||||||
Sbjct: 541  ggacatgttggacttactcctcaggctattagtgttcttggaggttttagacctcaagga 600

                                                                        
Query: 601  aagaatatttccagcgcagtcaaggttgtggagacttctttggctttgcaggaagtgggg 660
            ||||||||||| || || |||||||||||||||||| |||||   ||||| ||||  |||
Sbjct: 601  aagaatatttctagtgctgtcaaggttgtggagactgctttgcaattgcaagaagcaggg 660

                                                                        
Query: 661  tgtttttctgttgttttggaatgtgtacctgcacctgtggctgctgctgctacatctgct 720
            ||||| |||||||||||||| || || ||||| ||||| |||||||| ||||||||||||
Sbjct: 661  tgtttctctgttgttttggagtgcgtgcctgcgcctgtagctgctgcggctacatctgct 720

                                                                        
Query: 721  cttcgaattcccaccattggcattggcgcagggcctttctgcagtgggcaggtgttagtt 780
            ||||||||||| |||||||||||||| ||||| ||||| || ||||| ||||||||||||
Sbjct: 721  cttcgaattcctaccattggcattggagcaggtcctttttgtagtggccaggtgttagtt 780

                                                                        
Query: 781  taccatgaccttctaggaatgttgcagcacccacatcatgccaaggttactccaaagttt 840
            |||||||| ||  | || ||| |||| |||||||||||||| ||||||||||||||||||
Sbjct: 781  taccatgatctattgggcatgctgcaacacccacatcatgcgaaggttactccaaagttt 840

                                                                        
Query: 841  tgtaagcagtatgcgcaagtgggagatgtcataaacaaagctctgcttgaatacaaagaa 900
            |||||||||| ||| |  ||||| |||||||||||||||||||| || |||||||| |||
Sbjct: 841  tgtaagcagtttgcacgtgtgggggatgtcataaacaaagctcttctcgaatacaaggaa 900

                                                                        
Query: 901  gaagtaacaaacagttcattcccaggtcctgcccacagcccatataaaatcaatgcagct 960
            ||||||| |||  ||||||||||||| ||||| ||||| ||||||||||||| |||||||
Sbjct: 901  gaagtaataaatggttcattcccaggacctgctcacagtccatataaaatcagtgcagct 960

                                                                        
Query: 961  gatataaatggtttattgaatgaacttcaaaagttaggtctaaacaaggccgcatcagca 1020
            ||||| |||||||| |||| |||||| |||||||||||| |  ||||||| | ||||  |
Sbjct: 961  gatatgaatggtttcttgagtgaactgcaaaagttaggtttggacaaggcagtatcatta 1020

                                                     
Query: 1021 gcagctgcagcagctgagaagatcaaaacatctgaatcatt 1061
            |||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 1021 gcagctgcagcagctgagaagatacaaacagctgaatcatt 1061