Jatropha Genome Database
- JcCB0076151.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0076151.10 + phase: 0 /pseudo
(662 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005341 Meiotic coiled-coil protein, putative 537 e-152
>29912.m005341 Meiotic coiled-coil protein, putative
Length = 684
Score = 537 bits (271), Expect = e-152
Identities = 418/467 (89%)
Strand = Plus / Plus
Query: 1 atgcagtctaagaaacgaggtctttcattggacgagaaacgtgaaaagattcttcagata 60
|||||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||| |||
Sbjct: 1 atgcagtctaagaagcgagggctttcgttggatgagaaacgtgagaagattcttcaaata 60
Query: 61 ttttatgagtcacaggatttcttccttcttaaggagcttgagaaattgggccccaaaaaa 120
||||| || |||||||| ||||| || |||||||| |||||||| ||||| |||||||||
Sbjct: 61 ttttacgactcacaggacttctttctccttaaggaacttgagaagttggggcccaaaaaa 120
Query: 121 ggtgtaattagccagtctgtgaaagatgttgtccagagtttagttgatgatgaccttgtt 180
|| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 121 ggcgtgattagccagtctgtgaaagatgttgtccagagcttagttgatgatgatcttgtt 180
Query: 181 tcaaaagacaagataggaacttccgtatatttctggagtcttcctagttgtgctggaaat 240
||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||
Sbjct: 181 tcaaaagacaagataggaacttcagtatatttttggagtcttcctagctgtgccggaaat 240
Query: 241 cagttaaggaatgtataccggagactcgaatctgacgtgcaaagtagtaagaagcggtat 300
||||| |||||||||||| | | || |||||||| ||||||| |||||||||||||||
Sbjct: 241 cagttgaggaatgtatactgcaaccttgaatctgatctgcaaagcagtaagaagcggtat 300
Query: 301 gcagaacttgttgatcagtgtggtgggctaaaaaagggacgtgaggaatctgatgaacga 360
|||||||| ||||||| ||||| ||| | ||||| || |||||||||||||||||||||
Sbjct: 301 gcagaactcgttgatcggtgtgatggattgaaaaaagggcgtgaggaatctgatgaacga 360
Query: 361 gaggaggcactagctgagctaaaagccattgaactaaagcataatgaactgaaggaggag 420
||||||||| |||| || ||||||| |||||| ||||||||| ||| ||||||||||||
Sbjct: 361 gaggaggcattagccgacttaaaagcaattgaattaaagcatagtgagctgaaggaggag 420
Query: 421 atgggacaatatgcggataatgatcctgctgcctttgaagcaatgaa 467
|||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 421 atgggacaatatgcagacaatgatcctgctgcctttgaagcaatgaa 467
Score = 172 bits (87), Expect = 2e-42
Identities = 129/143 (90%)
Strand = Plus / Plus
Query: 489 acagataacatcttcacgttgcgacaatggtgttcaaacaacttccctgaggctaaagag 548
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 508 acagacaacatcttcacgttgcgacaatggtgttcgaacaacttccccgaggccaaagag 567
Query: 549 cagcttgagaacatgtataaggagatcggaataactgatgattttgattacttggagcct 608
|||||||| |||||||| |||||||| |||||||| ||||||||||| || |||||||||
Sbjct: 568 cagcttgaaaacatgtacaaggagatgggaataacagatgattttgactatttggagcct 627
Query: 609 ttagcagttgctccacttagctc 631
||| |||| | |||||| |||||
Sbjct: 628 ttatcagtcgttccactcagctc 650