Jatropha Genome Database

JcCB0075691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0075691.10 + phase: 0 /pseudo
         (395 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013741 voltage-dependent anion-selective channel, putative      68   4e-11

>30170.m013741 voltage-dependent anion-selective channel, putative
          Length = 828

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 145 aagggaggtctgtccatcggggatgtgtcaacacaacataaattcaagaatggctcactt 204
           |||||||| ||||||   ||||||||| |||||||||  ||||||||||||||||| |||
Sbjct: 139 aagggaggcctgtcctctggggatgtggcaacacaactgaaattcaagaatggctcgctt 198

                                                                       
Query: 205 gatgtcaaactcgatacacaatcaaacattctaacaaccctcagactcactgatttccca 264
           ||  ||||| || | ||| ||||||| || ||| | ||||| | |   || ||  | |||
Sbjct: 199 gacatcaaaatcaacacagaatcaaatatcctagctacccttacagcaacagaacttcca 258

                                                             
Query: 265 tcatccacaaaagtcattgcttctttaaaattgccggattacaactctgg 314
           |||||||||||||| || |||||| | ||| |||| |||||||| |||||
Sbjct: 259 tcatccacaaaagttatagcttctgttaaactgcctgattacaattctgg 308