Jatropha Genome Database
- JcCB0075571.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0075571.10 - phase: 0 /partial
(2101 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003441 hypothetical protein 228 1e-58
29794.m003359 conserved hypothetical protein 74 4e-12
>30146.m003441 hypothetical protein
Length = 2352
Score = 228 bits (115), Expect = 1e-58
Identities = 172/191 (90%)
Strand = Plus / Plus
Query: 1 atgagagggccaaaagatgaggaaaaaatcatgagtcctatatttcctaggcttcatgtg 60
||||||||| ||||||||||||| ||||| || |||||||| |||||||||||||||||
Sbjct: 4 atgagagggacaaaagatgaggataaaatgataagtcctatgtttcctaggcttcatgtc 63
Query: 61 aatgatacagagaaaggagggcccaaggcacctccaaggaacaaaatggctctgtatgaa 120
||||||||||||||||||||||| | |||||||||||| ||||| |||||||| ||||||
Sbjct: 64 aatgatacagagaaaggagggccaagggcacctccaagaaacaagatggctctttatgaa 123
Query: 121 caactcagtatcccttctcaaaggtttagttctggatcgtcatccatgttgcctcttcca 180
||||| |||||||||||| || | ||||||||||||| ||||||||||||||||||||
Sbjct: 124 caactgggtatcccttctcgaaaggttagttctggatcagcatccatgttgcctcttcca 183
Query: 181 ccaaacaatgg 191
|| ||||||||
Sbjct: 184 cctaacaatgg 194
Score = 155 bits (78), Expect = 1e-36
Identities = 519/666 (77%)
Strand = Plus / Plus
Query: 1091 atgggtctttgcaagtgggaaacgttcaaagacgagatgatgtctcaaaaacttccatga 1150
|||||||||||||||| ||| | ||| |||| | |||||| |||| |||||||| ||
Sbjct: 1127 atgggtctttgcaagtaggagatgttgaaaggcacaatgatggctcagaaacttccttgg 1186
Query: 1151 tggactctgtatctgcttttggtataacttctgacaatgttattagagtaataggtgagg 1210
||||||| |||||||||| | ||| | |||| ||||| | ||| ||||||| |||
Sbjct: 1187 tggactccttatctgctttggaaatatcgcctgatgatgttgtaagaataataggcgaga 1246
Query: 1211 gacaattttgggaggcaagaagagctattgtcaaacaacaaagagaattcaagatacaag 1270
|||||| ||| | ||||||||| |||||||| || ||||||| ||||| | ||||
Sbjct: 1247 aacaattctggaaagcaagaagaatcattgtcaatcagcaaagagcattcacagtgcaag 1306
Query: 1271 tatttgaattacataggctgataaaggtacaaatgttgattgctggatcgcctgatttat 1330
||| || ||||||||||| ||||||||||||| |||||||||| || || | |||
Sbjct: 1307 tatccgagttacataggctcataaaggtacaaaaactgattgctggttcaccggcactat 1366
Query: 1331 tgcttgaagataatatttatttggcaaaagcttcattggaggtgtctccagtcaagaagg 1390
|||| |||| || ||||||||| |||||||| ||| ||| ||| | || ||||
Sbjct: 1367 tgctgaaagacaagttttatttgggaaaagctttcttgaaggcctctgaggctaaaaagg 1426
Query: 1391 ttgcttctgagaatgctagagaacaaccacctctaattgataaacaaaaggatgtttctc 1450
|| | ||| | |||||| |||||||||||| | ||||| ||||| || |||| ||| |
Sbjct: 1427 ttccatctaattatgctatagaacaaccaccaccaattgttaaaccgaaagatggttccc 1486
Query: 1451 agaagccgtatcctagtgctgaatttgctgatgaaaatgctgttgtgaagcttccccttc 1510
||||||| | |||| |||||||||| || || ||||| |||| |||||| |||||
Sbjct: 1487 agaagccacactctagcactgaatttgccgaagagaatgcagttgcaaagctttcccttt 1546
Query: 1511 ctcatgtgaacaatgaaacaagtaaaggacttcttacccaacaatcaaatgacggctctc 1570
|| ||| || |||||| ||||||||||||| ||| | ||||||||| | || |||
Sbjct: 1547 ctgctgttaataatgaagtcagtaaaggacttcatacaaatcaatcaaattatggatctg 1606
Query: 1571 attcagaaggtgtactactgtctcctattgctgccaatactagacaatctccatggtgtt 1630
|||||| ||| || | ||||| ||||| ||||| || ||| ||||||||||||||
Sbjct: 1607 attcaggagggcatctgccagctcctgttgctaccaattctggaccatctccatggtgtt 1666
Query: 1631 tcccaccccaaggaaatcagtggttagttccagtcatgtcccactctgagggtcttgttt 1690
|||| || | | |||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1667 tcccgccgcctagcaatcagtggttagttccagtaatgtccccttctgagggtcttgttt 1726
Query: 1691 acaagccctacgcagggccgtgccctccaactgcaggattcatagcgccagtttatggca 1750
||||||| ||| ||||||| |||||||||||||| ||||| || || | ||||||||||
Sbjct: 1727 acaagccatacacagggccatgccctccaactgccggatttatggcacaggtttatggca 1786
Query: 1751 aatgtg 1756
| ||||
Sbjct: 1787 actgtg 1792
Score = 89.7 bits (45), Expect = 6e-17
Identities = 463/601 (77%), Gaps = 6/601 (0%)
Strand = Plus / Plus
Query: 259 tcccctgcatcttcactttccgaagagtctttttctcattcctttggtggagttaagcta 318
||||||||| |||||| ||| || ||||||||||| |||||| || |||| |||||| |
Sbjct: 295 tcccctgcaccttcacattctgagaagtctttttcttattcctctgatggaattaagcga 354
Query: 319 agcactaaaatggctagcccagaatggaaatctatgaattccacagatgatcgaaatttg 378
|||| ||| |||| | | ||||||||| || ||||||| || ||| || || ||||
Sbjct: 355 agcaataagatggaaaatcaagaatggaagtccatgaattgtacgaatggtcaaagtttg 414
Query: 379 aaaaccacacagccattatcatttattgctgaaagcaattcgtttcaatcacacaatttt 438
|||||||||||| | || | || || |||| |||||||| ||||| | ||||||||
Sbjct: 415 aaaaccacacagtctttgttatctaatgct---agcaattcatttcagttgcacaatttc 471
Query: 439 gccaacttcaaaaacgtctcgtgcaataaatttggtgatgaaaaagattttggagttcct 498
|| |||| |||||| |||| || || || |||| ||||||| |||||| ||||| ||
Sbjct: 472 tcccacttaaaaaacttctcatggaagaagattggatatgaaaatgattttcgagtttct 531
Query: 499 acctcttcccagtcaggagctgttttgctttgta---gcagtaaacacaataaagagcaa 555
|||| ||||||||||||| ||| || || || ||||| ||||||||||||| |
Sbjct: 532 ggctctgcccagtcaggagcagttccgcattctaacagcagtcaacacaataaagataga 591
Query: 556 gatagtcagccttgctggaatttgagcttctcaatgcagttccaaaatggttctgaaaag 615
|| | || || |||||||| |||||||| |||||||| || || |||| |||||||||
Sbjct: 592 gaaaaccaaccatgctggaacttgagcttttcaatgcactttcagaatgtctctgaaaag 651
Query: 616 cggaggaaaggaactggcaccgtaaatcaaaaagcaagagagtctatgaggaagcaagct 675
| || |||||| |||||| | || || ||| |||| |||||||| ||||| ||| ||
Sbjct: 652 cagaagaaaggtcctggcatcatagatttaaaggcaacagagtctacaaggaaccaaact 711
Query: 676 gaagagaacgcaaaaatatctcatgcttttctggatcctgtggagagaccagcttcagtc 735
|||||| | |||||| || | |||| ||||| | ||| ||| || | |||
Sbjct: 712 gaagagcagagaaaaatgtccgaggcttgcaaggatcttagggaaagatattctcctgtc 771
Query: 736 ccatcagttcaagataaaacgtcagtagatgcatcctcgagcccatcagctaaagttaag 795
|||||| |||| |||||||| |||| |||| |||| | |||||||| | ||||||||
Sbjct: 772 ccatcatttcatgataaaacttcagcagatccatcatgtagcccatcgggaaaagttaaa 831
Query: 796 agaactgaatcattgaagcgagcacatccattgtcaaaccaggaaaacagtagcagttca 855
||| |||||||| |||||||||||||||||| |||| | ||||| |||| |||||||||
Sbjct: 832 agacctgaatcactgaagcgagcacatccatcgtcatatcaggatcacagaagcagttca 891
Query: 856 g 856
|
Sbjct: 892 g 892
>29794.m003359 conserved hypothetical protein
Length = 2163
Score = 73.8 bits (37), Expect = 4e-12
Identities = 109/133 (81%)
Strand = Plus / Plus
Query: 16 gatgaggaaaaaatcatgagtcctatatttcctaggcttcatgtgaatgatacagagaaa 75
||||| ||||| || ||| | ||||| || |||||||||||||||||||||||||| |||
Sbjct: 28 gatgatgaaaagatgatggggcctatgttccctaggcttcatgtgaatgatacagataaa 87
Query: 76 ggagggcccaaggcacctccaaggaacaaaatggctctgtatgaacaactcagtatccct 135
|||||||| | || || || ||||| || ||||| || || || || || ||||| |||
Sbjct: 88 ggagggccaagagctccaccgaggaataagatggccctttacgagcagcttagtattcct 147
Query: 136 tctcaaaggttta 148
||||| |||||||
Sbjct: 148 tctcagaggttta 160