Jatropha Genome Database
- JcCB0075441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0075441.10 - phase: 0 /partial
(1413 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29780.m001375 glutamate decarboxylase, putative 908 0.0
27914.m000427 glutamate decarboxylase, putative 595 e-169
27914.m000425 glutamate decarboxylase, putative 488 e-137
29780.m001376 glutamate decarboxylase, putative 299 2e-80
29662.m000447 glutamate decarboxylase, putative 170 1e-41
>29780.m001375 glutamate decarboxylase, putative
Length = 894
Score = 908 bits (458), Expect = 0.0
Identities = 786/894 (87%), Gaps = 1/894 (0%)
Strand = Plus / Plus
Query: 1 atggtgctatctaaaatcgcttcagagtctgacgtttccgttcactccaccttcgcctct 60
|||||||| || ||||| |||||| ||||||| || || |||||||||||||| ||||||
Sbjct: 1 atggtgctgtcaaaaatagcttcacagtctgatgtatcggttcactccacctttgcctct 60
Query: 61 cgctatgtccgggagtcacttccaaggtataagatgccggaaaactctatacctaaggag 120
|||||||| || ||||||||||||||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 61 cgctatgttcgagagtcacttccaaggtacaagatgccggagaactcgataccgaaggag 120
Query: 121 gcggcgtttcagataataaatgatgagctgatgcttgatggaaagccaaggctgaatttg 180
|| || || ||||| ||||| |||||||||||||||||||| || || ||| |||| |||
Sbjct: 121 gcagcattccagattataaacgatgagctgatgcttgatgggaaaccgaggttgaacttg 180
Query: 181 gcatcttttgtgacgacctggatggagcctgaatgtgataagcttattatggatgccatg 240
||||| || ||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 gcatcattcgtgacaacttggatggagcctgaatgtgataagcttattatggacgccatg 240
Query: 241 aacaagaactatgttgacatggatgagtaccctgtcaccacggagcttcagaatcgatgt 300
||||| |||||||||||||||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 241 aacaaaaactatgttgacatggatgagtaccccgtcaccactgagcttcagaaccggtgc 300
Query: 301 gtaaacatgatagcacatttattcaatgctccattgggagaatcggaggcggcagtcggg 360
|| ||||||||||||||| | |||||||||||| ||||||| || ||||| || ||||||
Sbjct: 301 gtgaacatgatagcacatctgttcaatgctccactgggagactctgaggctgctgtcggg 360
Query: 361 gtcggaacagtaggttcatcggaggctataatgctagcagggcttgcattcaagagaaaa 420
|| ||||| ||||| ||||| ||||| |||||| | || || ||||| |||||||||||
Sbjct: 361 gtaggaaccgtaggatcatcagaggccataatgttggctggtcttgccttcaagagaaag 420
Query: 421 tggcaaaacaagagaaaagctgaaggaaaaccatatgacaagcccaacattgtaactgga 480
|||||||||||| | || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 tggcaaaacaagcgtaaggctgaaggaaaaccttatgacaagcccaacattgtaactggt 480
Query: 481 gccaatgttcaagtctgctgggagaaatttgcaaggtattttgaagtagaattaaaggaa 540
||||||||||| || ||||||||||||||||||||||| ||||| |||||| | ||||||
Sbjct: 481 gccaatgttcaggtgtgctgggagaaatttgcaaggtactttgaggtagaactgaaggaa 540
Query: 541 gtaaagctaagtgaagggtgctatgtaatggacccagtcaaggcagtagaaatggtagat 600
|| ||||||| ||||||| |||||||||||||||||| | || | |||||||| |||
Sbjct: 541 gtgaagctaaaggaagggtactatgtaatggacccagtacaagctgctgaaatggtggat 600
Query: 601 gagaacactatttgtgtagctgcaattttgggttctacacttaatggagaatttgaagat 660
|| ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 601 gaaaacactatttgcgtagctgccattttgggttctacccttaatggagaatttgaagat 660
Query: 661 gtgaagctattgaatgatttattagtagagaaaaataaagttacaggatgggatactcct 720
|| ||||| ||||||||||| || || ||||| |||||||| || || |||||||||||
Sbjct: 661 gtcaagcttttgaatgatttgttggtcgagaagaataaagtcaccgggtgggatactcca 720
Query: 721 atccatgtggatgcagccagtgggggattcattgcaccatttttgtggccagagcttgaa 780
|| ||||| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 721 attcatgttgatgcagctagtggtggatttattgcaccattcttgtggccagagcttgaa 780
Query: 781 tgggactttagacttccattggtgaagagtattaatgttagtggacacaaatatgggctt 840
|||||||| || ||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 781 tgggacttcaggcttccattggtcaaaagtattaatgttagtggccacaaatatggcctt 840
Query: 841 gtctatgctggtgttgggt-gggttatttggaggagcaaagaagatttgcctga 893
|||||||| ||| |||| | |||||||||||||||||||||| || ||||||||
Sbjct: 841 gtctatgccggtattggttggggttatttggaggagcaaagaggacttgcctga 894
>27914.m000427 glutamate decarboxylase, putative
Length = 1497
Score = 595 bits (300), Expect = e-169
Identities = 1035/1280 (80%)
Strand = Plus / Plus
Query: 31 gacgtttccgttcactccaccttcgcctctcgctatgtccgggagtcacttccaaggtat 90
||||| ||||||||||| |||||||| || || ||||| || | |||||||| ||| |
Sbjct: 31 gacgtctccgttcactcaaccttcgcttcccgatatgttcgagcttcacttcctcggttt 90
Query: 91 aagatgccggaaaactctatacctaaggaggcggcgtttcagataataaatgatgagctg 150
||||||||||| | ||| || || || || || || | ||||||||||| ||||||||
Sbjct: 91 aagatgccggagagctcgatcccaaaagaagcagcttaccagataataaacgatgagcta 150
Query: 151 atgcttgatggaaagccaaggctgaatttggcatcttttgtgacgacctggatggagcct 210
||| | || ||||| ||||| |||||||||| || |||||||| || |||||||| |||
Sbjct: 151 atgttagacggaaatccaagattgaatttggcgtcatttgtgactacttggatggaacct 210
Query: 211 gaatgtgataagcttattatggatgccatgaacaagaactatgttgacatggatgagtac 270
|| |||||||||||||| |||| | | || ||||| |||||||| |||||||||||||||
Sbjct: 211 gagtgtgataagcttataatggcttctatcaacaaaaactatgtcgacatggatgagtac 270
Query: 271 cctgtcaccacggagcttcagaatcgatgtgtaaacatgatagcacatttattcaatgct 330
|||||||| || || | ||||| |||||||| || |||||||||||| | || || ||
Sbjct: 271 cctgtcactactgaattgcagaaccgatgtgttaatatgatagcacatctctttaacgca 330
Query: 331 ccattgggagaatcggaggcggcagtcggggtcggaacagtaggttcatcggaggctata 390
||| | ||||| || ||| | ||||| || || ||||||||||| || || |||||||||
Sbjct: 331 ccacttggagattcagagactgcagttggagtaggaacagtaggatcttcagaggctata 390
Query: 391 atgctagcagggcttgcattcaagagaaaatggcaaaacaagagaaaagctgaaggaaaa 450
||| | || || | |||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 391 atgttggctggattagcattcaagagaaagtggcagaacaagagaaaagctgagggaaag 450
Query: 451 ccatatgacaagcccaacattgtaactggagccaatgttcaagtctgctgggagaaattt 510
|| ||||| ||||| |||||||| ||||| ||||||||||| || || ||||||||||||
Sbjct: 451 ccctatgataagcctaacattgtcactggtgccaatgttcaggtttgttgggagaaattt 510
Query: 511 gcaaggtattttgaagtagaattaaaggaagtaaagctaagtgaagggtgctatgtaatg 570
||||||||||||||||| || || |||||||| || || || || |||| |||||| |||
Sbjct: 511 gcaaggtattttgaagtggagttgaaggaagtgaaacttagagatgggtactatgtgatg 570
Query: 571 gacccagtcaaggcagtagaaatggtagatgagaacactatttgtgtagctgcaattttg 630
|| || || || ||||| |||||||| ||||||||||| || || || ||||| ||| |
Sbjct: 571 gatcctgtgaaagcagttgaaatggttgatgagaacacaatctgcgtcgctgctattctt 630
Query: 631 ggttctacacttaatggagaatttgaagatgtgaagctattgaatgatttattagtagag 690
||||| || ||||||||||||||||||||||| ||||| ||||||||| | || ||||
Sbjct: 631 ggttccacccttaatggagaatttgaagatgtaaagctcttgaatgatctcttgacagag 690
Query: 691 aaaaataaagttacaggatgggatactcctatccatgtggatgcagccagtgggggattc 750
||||| || || |||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 691 aaaaacaagcaaactggatgggatactccaatacatgttgatgcagcaagtggtggattt 750
Query: 751 attgcaccatttttgtggccagagcttgaatgggactttagacttccattggtgaagagt 810
|||||||| ||| | | ||||| ||||| ||||| || ||| | |||||||||||||||
Sbjct: 751 attgcaccttttctttacccagaacttgagtgggatttcagattgccattggtgaagagt 810
Query: 811 attaatgttagtggacacaaatatgggcttgtctatgctggtgttgggtgggttatttgg 870
|| ||||||||||| ||||||||||| || ||||||||||| |||| ||||| ||||||
Sbjct: 811 atcaatgttagtgggcacaaatatggactagtctatgctggaattggttgggtcatttgg 870
Query: 871 aggagcaaagaagatttgcctgaagaactcatttttcatattaactatcttggaactgat 930
|||| |||||| || |||||||| |||||||| || ||||| |||||||||||| |||||
Sbjct: 871 aggaacaaagatgacttgcctgatgaactcatcttccatatcaactatcttggagctgat 930
Query: 931 caacccactttcactctcaatttttcgaaaggttcaagccaaatcattgctcaatattat 990
||||| || ||||| |||||||| || |||||||| |||||| |||||||||| || |||
Sbjct: 931 caacctaccttcaccctcaatttctccaaaggttctagccaagtcattgctcagtactat 990
Query: 991 caactaatccgtctcggctacgagggataccgaaatgtgatggagaactgccaccagaat 1050
||||| || || | || || ||||||||| |||| | ||||| || ||| | ||
Sbjct: 991 caactcattcgcttgggttatgagggatacagaaacattatggaaaattgcagagacaac 1050
Query: 1051 gcaatagtcctgaaagagggactagaaaaaacaggacggttcaacatagtgtcaaaggac 1110
| || || || || |||||||| || ||||| | |||| ||| || ||||||||
Sbjct: 1051 atgctggttctcaaggacggactagagaagacagggagattcaccattgtctcaaaggat 1110
Query: 1111 attggagttcctctagtggcattttcactcaaggacaatagcaaacacactgagtttgaa 1170
| ||| || || ||||| |||||||| || || ||||| |||| || | ||||| ||
Sbjct: 1111 aatggtgtaccactagttgcattttccctgaaagacaacagcagccataacgagttcgag 1170
Query: 1171 atagctgatatgctacgtcgttttggatggattgtgcctgcctacacaatgccagcggat 1230
|| |||| ||||| | | ||||| |||||||| ||||| |||||||||||| | |||
Sbjct: 1171 atttctgaattgctaaggaggtttggctggattgttcctgcatacacaatgccacctgat 1230
Query: 1231 gctcaacacattacggtgcttcgcgtcgtcattagagaagatttctcgcgcactctcgcg 1290
||||||||| |||| || || || || || |||||||||||||| ||||||||| ||||
Sbjct: 1231 gctcaacacgttactgtcctccgtgttgtgattagagaagatttttcgcgcactttcgca 1290
Query: 1291 gagcgccttgtgcttgatat 1310
||||| ||||| ||||||||
Sbjct: 1291 gagcggcttgttcttgatat 1310
>27914.m000425 glutamate decarboxylase, putative
Length = 1398
Score = 488 bits (246), Expect = e-137
Identities = 738/902 (81%)
Strand = Plus / Plus
Query: 139 aatgatgagctgatgcttgatggaaagccaaggctgaatttggcatcttttgtgacgacc 198
||||| ||||| ||| | |||||||| |||||||| || ||||||| ||||| || ||
Sbjct: 46 aatgacgagctaatgttggatggaaatccaaggcttaacctggcatcctttgttactaca 105
Query: 199 tggatggagcctgaatgtgataagcttattatggatgccatgaacaagaactatgttgac 258
|||||||||||||| || ||||||||||| ||| | || | || |||||||||||||||
Sbjct: 106 tggatggagcctgagtgcgataagcttatcatgtcttccgtcaataagaactatgttgac 165
Query: 259 atggatgagtaccctgtcaccacggagcttcagaatcgatgtgtaaacatgatagcacat 318
||||||||||| ||||||||||| || | |||||||||||||| |||||||||||||||
Sbjct: 166 atggatgagtatcctgtcaccactgaattgcagaatcgatgtgtcaacatgatagcacat 225
Query: 319 ttattcaatgctccattgggagaatcggaggcggcagtcggggtcggaacagtaggttca 378
| || || || ||| | ||||| || ||| | ||||| || || || || || || ||
Sbjct: 226 ctttttaacgcaccacttggagactcagagactgcagttggagtagggactgttggatct 285
Query: 379 tcggaggctataatgctagcagggcttgcattcaagagaaaatggcaaaacaagagaaaa 438
|| ||||| |||||||| || || | ||||| |||||||| ||||| |||| |||||||
Sbjct: 286 tcagaggcaataatgcttgctggattagcatttaagagaaagtggcagaacaggagaaaa 345
Query: 439 gctgaaggaaaaccatatgacaagcccaacattgtaactggagccaatgttcaagtctgc 498
|| || ||||| || ||||| | |||||||||||||| || ||||||||||| ||||||
Sbjct: 346 gccgagggaaagccttatgatagtcccaacattgtaaccggtgccaatgttcaggtctgc 405
Query: 499 tgggagaaatttgcaaggtattttgaagtagaattaaaggaagtaaagctaagtgaaggg 558
|||||||||||||||||||| ||||| || || | || || || |||||||| ||
Sbjct: 406 tgggagaaatttgcaaggtactttgaggtggagctgaaagaggtgaagctaagggagaac 465
Query: 559 tgctatgtaatggacccagtcaaggcagtagaaatggtagatgagaacactatttgtgta 618
| |||||||||||||| | |||||||| |||||||| ||||| ||||| || || |||
Sbjct: 466 tattatgtaatggaccctgaaaaggcagtggaaatggttgatgaaaacacaatctgcgta 525
Query: 619 gctgcaattttgggttctacacttaatggagaatttgaagatgtgaagctattgaatgat 678
||||| ||| | || ||||| | |||||||||||||||||||| ||||| |||||||||
Sbjct: 526 gctgctattcttggctctactttaaatggagaatttgaagatgtcaagctcttgaatgat 585
Query: 679 ttattagtagagaaaaataaagttacaggatgggatactcctatccatgtggatgcagcc 738
| || || ||||| || || || |||||| ||||||| || ||||||||||||||
Sbjct: 586 cttttggttgagaagaacaagaaaactggatggaatactccaattcatgtggatgcagca 645
Query: 739 agtgggggattcattgcaccatttttgtggccagagcttgaatgggactttagacttcca 798
||||| || || |||||||| ||| | | ||||||||||| ||||| |||||| | |||
Sbjct: 646 agtggtgggtttattgcaccttttctttacccagagcttgagtgggattttagattgcca 705
Query: 799 ttggtgaagagtattaatgttagtggacacaaatatgggcttgtctatgctggtgttggg 858
|| |||||||| |||||||||||||| || |||||||| ||||| |||||||| ||||
Sbjct: 706 ttagtgaagagcattaatgttagtggccataaatatggacttgtttatgctgggattggt 765
Query: 859 tgggttatttggaggagcaaagaagatttgcctgaagaactcatttttcatattaactat 918
||| | |||||||||||||||||||| ||||||||||| ||||| || |||||||| |||
Sbjct: 766 tggatcatttggaggagcaaagaagacttgcctgaagagctcatcttccatattaattat 825
Query: 919 cttggaactgatcaacccactttcactctcaatttttcgaaaggttcaagccaaatcatt 978
|||||| ||||||| || |||||||| |||||||| || |||||||| || ||| |||||
Sbjct: 826 cttggagctgatcagcctactttcaccctcaatttctccaaaggttctagtcaagtcatt 885
Query: 979 gctcaatattatcaactaatccgtctcggctacgagggataccgaaatgtgatggagaac 1038
||||| || ||||||||||||||| | || | ||||||||| ||| || |||||||||
Sbjct: 886 gctcagtactatcaactaatccgtttgggttttgagggatacaaaaacgtaatggagaac 945
Query: 1039 tg 1040
||
Sbjct: 946 tg 947
>29780.m001376 glutamate decarboxylase, putative
Length = 543
Score = 299 bits (151), Expect = 2e-80
Identities = 259/295 (87%)
Strand = Plus / Plus
Query: 1013 agggataccgaaatgtgatggagaactgccaccagaatgcaatagtcctgaaagagggac 1072
||||||||||||| || |||||||| |||||||| || || || ||||||||||| ||||
Sbjct: 47 agggataccgaaacgtaatggagaattgccaccaaaacgctatggtcctgaaagaaggac 106
Query: 1073 tagaaaaaacaggacggttcaacatagtgtcaaaggacattggagttcctctagtggcat 1132
| |||||||||||| |||||||||| ||||| ||||||||||||||||| || |||||||
Sbjct: 107 ttgaaaaaacaggaaggttcaacattgtgtcgaaggacattggagttccactggtggcat 166
Query: 1133 tttcactcaaggacaatagcaaacacactgagtttgaaatagctgatatgctacgtcgtt 1192
|||| ||||||||||| ||| ||||| ||| ||||| ||||| || | |||||||||||
Sbjct: 167 tttcgctcaaggacaacagccgacacaatgaatttgagatagccgaaacgctacgtcgtt 226
Query: 1193 ttggatggattgtgcctgcctacacaatgccagcggatgctcaacacattacggtgcttc 1252
| ||||||||||| || |||||||| ||||| ||||||||||| || || || |||||||
Sbjct: 227 tcggatggattgttcccgcctacacgatgcccgcggatgctcagcatatcaccgtgcttc 286
Query: 1253 gcgtcgtcattagagaagatttctcgcgcactctcgcggagcgccttgtgcttga 1307
|||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 287 gcgttgtgattagagaagatttctcgcgcactctcgccgagcgccttgtgcttga 341
>29662.m000447 glutamate decarboxylase, putative
Length = 1590
Score = 170 bits (86), Expect = 1e-41
Identities = 419/530 (79%)
Strand = Plus / Plus
Query: 139 aatgatgagctgatgcttgatggaaagccaaggctgaatttggcatcttttgtgacgacc 198
||||||||||| ||||| ||||| || || |||||||| ||||| || ||||| || ||
Sbjct: 256 aatgatgagctaatgctggatgggaatcccaggctgaacttggcttcctttgttacaaca 315
Query: 199 tggatggagcctgaatgtgataagcttattatggatgccatgaacaagaactatgttgac 258
|||||||||||||| ||| | || || || |||| | |||| |||||||| |||||||||
Sbjct: 316 tggatggagcctgagtgtaacaatctcatcatggcttccattaacaagaattatgttgac 375
Query: 259 atggatgagtaccctgtcaccacggagcttcagaatcgatgtgtaaacatgatagcacat 318
||||||||||||||||||||||| ||||| ||| |||| ||||| || |||||||| ||
Sbjct: 376 atggatgagtaccctgtcaccactgagctccaggatcgctgtgttaatatgatagctcac 435
Query: 319 ttattcaatgctccattgggagaatcggaggcggcagtcggggtcggaacagtaggttca 378
| ||| |||| || | ||||| || | ||||||||||||||||| || || ||
Sbjct: 436 atgttccatgcacctgttggagatgatgaaactgcagtcggggtcggaactgtgggatcg 495
Query: 379 tcggaggctataatgctagcagggcttgcattcaagagaaaatggcaaaacaagagaaaa 438
|| || ||||||||||| || || | || || || || || ||||| ||||| ||| |
Sbjct: 496 tcagaagctataatgctggctggattagcttttaaaaggaagtggcagcacaagcgaata 555
Query: 439 gctgaaggaaaaccatatgacaagcccaacattgtaactggagccaatgttcaagtctgc 498
|| || || ||||| | ||| ||||||||||| || || ||||| ||||| || |||||
Sbjct: 556 gcagagggcaaaccttctgataagcccaacatagtgacaggagctaatgtgcaggtctgt 615
Query: 499 tgggagaaatttgcaaggtattttgaagtagaattaaaggaagtaaagctaagtgaaggg 558
|||||||| |||||||| || |||||||| ||| | ||||| || ||| ||| || ||
Sbjct: 616 tgggagaagtttgcaagatactttgaagttgaactgaaggaggtgaagttaaaagagggc 675
Query: 559 tgctatgtaatggacccagtcaaggcagtagaaatggtagatgagaacactatttgtgta 618
| ||||| |||||||| || || ||||| |||||||| ||||||||||| || || |
Sbjct: 676 tattatgtgatggaccctgtgaaagcagttgaaatggtggatgagaacacaatctgcatt 735
Query: 619 gctgcaattttgggttctacacttaatggagaatttgaagatgtgaagct 668
|| || ||||| || || || || | |||||| |||||||||||||||||
Sbjct: 736 gcagccattttaggatcaaccctgactggagagtttgaagatgtgaagct 785
Score = 147 bits (74), Expect = 2e-34
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 799 ttggtgaagagtattaatgttagtggacacaaatatgggcttgtctatgctggtgttggg 858
||||||||||| |||||||||||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 916 ttggtgaagagcattaatgttagtggtcacaagtatggtcttgtttatgccggtgttggt 975
Query: 859 tgggttatttggaggagcaaagaagatttgcctgaagaactcatttttcatattaactat 918
|||||| | ||||||| || ||||| || || || || || || ||||| ||||||||
Sbjct: 976 tgggttgtgtggaggactaaggaagacttaccagaggagcttatctttcacattaactac 1035
Query: 919 cttggaactgatcaacccactttcactctcaatttttcgaaaggttcaagccaaatcatt 978
|||||| |||||||||| |||||||||||||| || || ||||| || || ||||| |||
Sbjct: 1036 cttggatctgatcaaccaactttcactctcaacttctcaaaaggctctagtcaaataatt 1095
Query: 979 gctcaatattatca 992
||||||||||||||
Sbjct: 1096 gctcaatattatca 1109