Jatropha Genome Database

JcCB0075081.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0075081.30 - phase: 0 /partial
         (357 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008758 protein binding protein, putative                       218   2e-56

>30128.m008758 protein binding protein, putative
          Length = 831

 Score =  218 bits (110), Expect = 2e-56
 Identities = 287/346 (82%)
 Strand = Plus / Plus

                                                                       
Query: 8   atgttgacattattatacatcatattcttggtgtggttgattcattcctgaaaaggagca 67
           ||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||  
Sbjct: 479 atgttgagattattctacatcatattcttggtgttgttgattcattccagaaaaggagtg 538

                                                                       
Query: 68  atcaacttcatgaaatgatgacatctgaaaccaaacaagaagagttcaagactctagttt 127
           |  ||  |||| ||||||  |   ||||||| ||||||  |||||||| ||||||||| |
Sbjct: 539 aaaaaactcatcaaatgaatatgcctgaaacaaaacaatcagagttcaggactctagtct 598

                                                                       
Query: 128 gtgatgcagcaaggcctttcctagctgcaagaacagacagatttgtgaatgagttggaat 187
            ||||||||| |||||||| ||||| |||||||||||  | || ||||||||||||||| 
Sbjct: 599 ctgatgcagccaggccttttctagcagcaagaacagattggttcgtgaatgagttggaac 658

                                                                       
Query: 188 tgtttcttgcttcaggtttcaatattgaagcttacgatgatgtttacatacagcagctgg 247
           | ||||||||||| || ||||| |||||||| || ||||| |||||||| |||||  | |
Sbjct: 659 tatttcttgcttcgggcttcaacattgaagcctatgatgaagtttacatgcagcaattag 718

                                                                       
Query: 248 gttggaacactcctggagcgactggtgagtctgcagatgtagaacctagtgtagccatac 307
           |||||||| |||||  || |||||||||| |||| ||||  |||||||||| |   | ||
Sbjct: 719 gttggaacgctcctacagtgactggtgaggctgcggatgcggaacctagtgaacagagac 778

                                                         
Query: 308 cagcagtcccatacttgtatatctttgatgatgactctgatgaaac 353
           | | | ||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 779 ctgtaatcccatacttgtacatcttcgatgatgactctgatgaaac 824