Jatropha Genome Database

JcCB0074501.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0074501.20 + phase: 0 
         (195 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002544 r2r3-myb transcription factor, putative                  76   8e-14

>30068.m002544 r2r3-myb transcription factor, putative
          Length = 807

 Score = 75.8 bits (38), Expect = 8e-14
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaagagctccttgttgttcaaaagttgggttgcatagaggaccatggactcctaga 60
           |||||||||||||| || ||||| ||||| || ||||||||||| ||||||||| |||||
Sbjct: 1   atgggaagagctccatgctgttctaaagtaggtttgcatagaggtccatggactgctaga 60

                                                                       
Query: 61  gaagacacattgcttattaaatatatccaagctcatggagaaggcaattggaggtccttg 120
           ||||| | | | || || || ||||| | ||| ||||| |||||| | ||||| ||| ||
Sbjct: 61  gaagataaactcctcatcaactatattcgagcacatggtgaaggccactggagatccctg 120

                         
Query: 121 cctaaaaaagctgg 134
           ||||| || |||||
Sbjct: 121 cctaagaaggctgg 134