Jatropha Genome Database
- JcCB0073371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0073371.10 - phase: 2 /partial
(841 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013673 conserved hypothetical protein 373 e-102
44978.m000014 conserved hypothetical protein 317 6e-86
>30170.m013673 conserved hypothetical protein
Length = 1854
Score = 373 bits (188), Expect = e-102
Identities = 621/765 (81%), Gaps = 9/765 (1%)
Strand = Plus / Plus
Query: 6 ttctcaataaagagaacttgggtgaaagaatgcaagattcacccagtttgtccatgccac 65
|||| ||||||||||| |||||||||||| ||||||| |||||||| |||||||||| |
Sbjct: 1016 ttcttaataaagagaatttgggtgaaagactgcaagactcacccagcttgtccatgcaat 1075
Query: 66 catccaacatcaacatgaaatctagagaaaaccctttcttgaatttagaacaacagaact 125
||||||| || || | ||||||| ||||||||||||||| | || | |||| |
Sbjct: 1076 catccaagatttacctaaaatctaaagaaaaccctttcttcatttcaaaacacc------ 1129
Query: 126 catatcaggaatcctcacaaattgagtttggacttgtcaactctgactctctcctcaacc 185
| || ||||| ||||| |||||||| ||||||| ||| |||| || |||||||| ||||
Sbjct: 1130 cctaccaggagtcctcgcaaattgaatttggacatgttaacttcgattctctccttaacc 1189
Query: 186 cttctcagaatggctcatccctaatcagc---agaaactttggttcttctaaggaactca 242
|||| |||||| |||| || |||||||| |||||||||| |||||| |||| | |
Sbjct: 1190 cttcacagaatagctcttcattaatcagctgcagaaactttgcatcttctcaggacatga 1249
Query: 243 ttggccaggagactatttcacaacattctgttcgccaattcatggatgattggcctaaaa 302
||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1250 gtggccaggaaactatttcacagcattcctttcgccaattcatggatgattggcctaaaa 1309
Query: 303 gccaatgtgatcaatctgccgtttcatggcctccacttgatgtgcaatcaaatagaaccc 362
| |||| |||||||||| | || || ||||||| |||||||||||||||| |||||||||
Sbjct: 1310 gtcaatctgatcaatcttctgtctcttggcctcaacttgatgtgcaatcagatagaaccc 1369
Query: 363 agttatcaatttcaatccccatagcttctgcagactttacatcttccacttccacttcaa 422
||||||| ||||||||||||| | | || ||||||||| || ||||||| || |||
Sbjct: 1370 agttatccatttcaatccccaatgatcctacagactttaagtccagcacttcctctccaa 1429
Query: 423 acaatgaaaaaattgcaccctctccattaagattatcatgtgatctggattctataaaaa 482
|||||||| | |||| ||| ||| |||| ||||| ||||| ||||||| ||| |||
Sbjct: 1430 gcaatgaaatatttgcggtctccccactaaggttatcccgtgatttggattcaatacaaa 1489
Query: 483 tgggaacaggaactggcattattctcaatgaacaaaaccaaaggcacgcaaattggattc 542
|||||| ||| || ||| || ||||||| || || |||| ||| |||||||||| |
Sbjct: 1490 cgggaacgggagttgatattgttttcaatgatcataaacaaaagcaagcaaattggagac 1549
Query: 543 ccatcccttggggaacttctatgggtggtccacttggagaggttttgcacaataccaata 602
| | ||||||| |||||| |||||||||| ||||||||||||||||| || | |||||
Sbjct: 1550 ctgtaccttgggaaacttcagtgggtggtcctcttggagaggttttgcataacagcaata 1609
Query: 603 acactgcctcggagtgcaagaattcatcggctctgaacctcttggctgagggatgggatt 662
||| ||| || ||||||||||||||||| | || ||||| |||| ||| |||||||
Sbjct: 1610 acagtgcttcagagtgcaagaattcatcaggacttaacctattggtagagagatgggaca 1669
Query: 663 gtagtcctcggttaggttcatctccaactggggtcttgcaaaaaactacattccattctc 722
| ||| ||| |||||||| ||||| |||||||| | ||||| |||||||| ||| |
Sbjct: 1670 gcagttctcagttaggtttgtctcctactggggtgctacaaaagactacatttggttcgc 1729
Query: 723 tgtcaaatagcagtgcaggaagcagcccaagagcagagaacaaca 767
| ||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1730 tttcaaatagcagtgcaggcagcagcccaagaacagagaacaaca 1774
>44978.m000014 conserved hypothetical protein
Length = 1059
Score = 317 bits (160), Expect = 6e-86
Identities = 525/643 (81%), Gaps = 9/643 (1%)
Strand = Plus / Plus
Query: 134 gaatcctcacaaattgagtttggacttgtcaactctgactctctcctcaacccttctcag 193
||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 343 gaatcatcacaaattgaatttggacttgtcaactctgactccctcctgaatccttcacag 402
Query: 194 aatggctcatccctaatcag---cagaaactttggttcttctaaggaactcattggccag 250
||| |||| | |||| || ||||||||||||||| ||| | || |||| || ||
Sbjct: 403 aatagctctcctttaattagttgcagaaactttggttcatctcaagatctcactgatcaa 462
Query: 251 gagactatttcacaacattctgttcgccaattcatggatgattggcctaaaagccaatgt 310
|| ||| | ||||||||||| || |||||||| |||||||||||||||||||| || | |
Sbjct: 463 gacactgtgtcacaacattcagtgcgccaatttatggatgattggcctaaaagtcagtct 522
Query: 311 gatcaatctgccgtttcatggcctccacttgatgtgcaatcaaatagaacccagttatca 370
|||| |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 523 gatcgatctgctgtttcatggcctcaacttgatgtgcaatcagatagaacccagttatct 582
Query: 371 atttcaatccccatagct--tc-tgcagactttacatcttccacttccacttcaaacaat 427
|||||||| ||||||| | || |||||||| | || ||||||||| || ||||||||
Sbjct: 583 atttcaattcccataggtcatcatgcagactacatgtcctccacttcctctccaaacaat 642
Query: 428 gaaaaaattgcaccctctccattaagattatcatgtgatctggattctataaaaatggga 487
|||||| | | | || || |||||||||| ||||| ||||| | ||| | |||||
Sbjct: 643 gaaaaagtgactctttcccctctaagattatcgcgtgatttggatccaatacagatgggg 702
Query: 488 acaggaactggcattattctcaatgaacaaaaccaaaggcacgcaaattggattcccatc 547
||| || | | || | ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 703 cttggagtcggtagtgttattaatgatcaaaaccaaaggcaagcaaattggatacccatc 762
Query: 548 ccttggggaacttctatgggtggtccacttggagaggttttgcacaataccaataacact 607
|||||| |||||| || || ||||| || |||||||||||||||||||| | ||||| |
Sbjct: 763 tcttgggaaacttcaattggcggtcctctaggagaggttttgcacaatacaagtaacagt 822
Query: 608 gcctcggagtgcaagaattcatcggctctgaacctcttggctgagggatgggattgtagt 667
|| ||||| |||| |||||| || ||||||||| || | || |||||||| |||||
Sbjct: 823 gct---gagtgtaagagttcatcagcactgaacctcatgacagaaggatgggacagtagt 879
Query: 668 cctcggttaggttcatctccaactggggtcttgcaaaaaactacattccattctctgtca 727
|||| | | || ||||||||||||||||||||||| ||||| ||||| ||| || |||
Sbjct: 880 cctcaggtgggatcatctccaactggggtcttgcagaaaaccacatttgcttcgctttca 939
Query: 728 aatagcagtgcaggaagcagcccaagagcagagaacaacaaga 770
|||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 940 aatagcagtggtggaagcagcccaagagcagagaacatcaaga 982