Jatropha Genome Database

JcCB0072841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0072841.10 + phase: 0 
         (360 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29790.m000842 conserved hypothetical protein                          258   2e-68

>29790.m000842 conserved hypothetical protein
          Length = 1509

 Score =  258 bits (130), Expect = 2e-68
 Identities = 240/276 (86%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  ggagaactctgttaaagagtgggaggtgaaagtgaagctcttgggagatggaaaggttga 71
           |||||| ||||||||||| |||||| |||||||||||||  |||||||||| || |||||
Sbjct: 12  ggagaattctgttaaagaatgggagatgaaagtgaagcttctgggagatgggaaagttga 71

                                                                       
Query: 72  taagttgaagaattcaatggtttca---aggtctccaatgaaactatggattttaagggc 128
            ||||||||||||||||||||||||   |||||||||||||| ||||||||||| |||||
Sbjct: 72  aaagttgaagaattcaatggtttcatcaaggtctccaatgaagctatggattttgagggc 131

                                                                       
Query: 129 aattacaactgctttgttatggacttgtgtagttcagttaatggctttgggagagatgtg 188
           ||||||||| |||||| ||||||||||||| |||||||||||||| || |||||| | ||
Sbjct: 132 aattacaacagctttgctatggacttgtgttgttcagttaatggcattaggagagctatg 191

                                                                       
Query: 189 ggggccaagattgttaaagggttggccttcttgttttagtcaatctgatgtccacctatc 248
           ||| || |||||||| || |||||||||||||||||||||||  |||||||  |  ||  
Sbjct: 192 gggtcctagattgttgaaaggttggccttcttgttttagtcatcctgatgttgaattaca 251

                                               
Query: 249 ttctattcctcccaaagttgttcttcctccaaagag 284
            ||| | ||| |||||||||||||||||||||||||
Sbjct: 252 ctctgtacctgccaaagttgttcttcctccaaagag 287