Jatropha Genome Database

JcCB0072041.20
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0072041.20 + phase: 0 
         (855 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29722.m000137 conserved hypothetical protein                          381   e-105

>29722.m000137 conserved hypothetical protein
          Length = 1218

 Score =  381 bits (192), Expect = e-105
 Identities = 564/688 (81%)
 Strand = Plus / Plus

                                                                       
Query: 92  cttcagctttgatattgagcttgagaaaccaccataacaagcatcataacagaagcccaa 151
           |||||||||||||| ||||| |||| |||||||| || |||||  | |||||||| ||||
Sbjct: 125 cttcagctttgataatgagcatgaggaaccaccacaagaagcacaacaacagaagaccaa 184

                                                                       
Query: 152 tgtttcaagctaatcgaagctcttgtgctttgttcgtaggcacttgggttccagatcaca 211
           || | ||||||||||  ||| | ||||| ||||| || ||||||||||||  |||| |||
Sbjct: 185 tgctgcaagctaatcagagcacctgtgcattgtttgtgggcacttgggttaaagatgaca 244

                                                                       
Query: 212 cttatcctcattaccaatcttctaattgccccattatagatcctcagttcaattgccaat 271
           |||| |||| ||||||||||||  |||| ||  |||| || ||||| || ||||||||| 
Sbjct: 245 cttaccctctttaccaatcttcacattgtccagttattgaccctcaatttaattgccaaa 304

                                                                       
Query: 272 cctacggtcgacctgattccgattacctcaagtacagatggcagccattgaattgcgagc 331
             ||||| |||||||| || |||||||||||||| |||||||||||  | ||||| ||||
Sbjct: 305 tgtacggccgacctgactctgattacctcaagtatagatggcagcctctcaattgtgagc 364

                                                                       
Query: 332 ttccaagattcaatggtgttcagtttttggagagaatggaagggaaaacaataatgtttg 391
           | ||||| |||||||| ||  | ||||||   | |||| |||| |||||| | |||||||
Sbjct: 365 tcccaaggttcaatggggtggaatttttgctcaaaatgaaaggcaaaacagtgatgtttg 424

                                                                       
Query: 392 ttggtgactctttgggaaggaatcaatgggagtctttgatttgtatgattttagcttctg 451
           ||||||||||  | || |||||||||||||||||| |||||||| ||||||||||  |||
Sbjct: 425 ttggtgactcccttgggaggaatcaatgggagtctctgatttgtttgattttagcgactg 484

                                                                       
Query: 452 tgcctgcttcaacttctacacagatgagcagaggaatgcctctttccgtcttcaagttct 511
           ||||| |  || || |||| || ||||||||||||   ||| | ||| ||||||||||||
Sbjct: 485 tgccttcaacagctgctacccaaatgagcagaggagatcctttctccatcttcaagttct 544

                                                                       
Query: 512 tggagtatggagtggtgattcaatattacaaagctccatacctggtagacatagatgtgg 571
           |||| |||||||||   ||    |||||||||||||||||  | ||||| ||||||||||
Sbjct: 545 tggattatggagtgtccatagcgtattacaaagctccatatttagtagatatagatgtgg 604

                                                                       
Query: 572 tgcaagggaagagaatcctaagactagaggatatatccggcaatggcaatgcttggcgaa 631
           |||||||||| ||||||||||   | ||||| || || ||||| |  ||||| ||| || 
Sbjct: 605 tgcaagggaaaagaatcctaaagttggaggacatttcgggcaacgcaaatgcgtggagac 664

                                                                       
Query: 632 acgctgacgttttggtgtttaacacaggtcattggtggagtcatcagaacgctcaacaag 691
           |||| || |||||| |||||||||| ||||||||||||| ||||||   | |||  ||||
Sbjct: 665 acgcagatgttttgttgtttaacactggtcattggtggaatcatcaaggctctcttcaag 724

                                                                       
Query: 692 ggtgggattacatggaatcaggaggcacgtactaccaagacatggaccggttagttgctt 751
           |||||||||||||||||||||||||||| || |||||||| ||||| || || |||||||
Sbjct: 725 ggtgggattacatggaatcaggaggcacatattaccaagatatggatcgtttggttgctt 784

                                       
Query: 752 tggagaaagggctaagaacatgggccaa 779
           |||||||||   ||||||||||||||||
Sbjct: 785 tggagaaagcattaagaacatgggccaa 812