Jatropha Genome Database

JcCB0071361.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0071361.20 - phase: 2 /partial
         (508 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m002027 conserved hypothetical protein                          232   2e-60

>29917.m002027 conserved hypothetical protein
          Length = 750

 Score =  232 bits (117), Expect = 2e-60
 Identities = 257/305 (84%), Gaps = 9/305 (2%)
 Strand = Plus / Plus

                                                                       
Query: 206 gaggcaaagccagttgacgaaattatttctgaagtaaggaatttttctgataaggatagt 265
           |||| ||||||| |||| || || ||||||||||||||| ||| |||||||||||| |||
Sbjct: 436 gaggaaaagccaattgaagagatcatttctgaagtaagggattcttctgataaggacagt 495

                                                                       
Query: 266 gattctgaagaagttgacttctggataccacctgcgggagagccttgggacttcgatgat 325
           ||| |||||||| ||||||||||||| |||||||  ||||||| ||||||||| ||||||
Sbjct: 496 gatactgaagaacttgacttctggatgccacctgttggagagcgttgggactttgatgat 555

                                                                       
Query: 326 ggaggagatcgatggggttctggtgaggagtcggggcaggaatgtggggaagaaaatgga 385
           ||||| |||||||||||||||| ||  ||||  | |||||||  || | |||||||||||
Sbjct: 556 ggaggtgatcgatggggttctgatggagagttagagcaggaaactgagaaagaaaatgga 615

                                                                       
Query: 386 ---------gcagttgaagataatggcaaggaatcagaagaactctctaaatgcacaaag 436
                    |||||||| || ||||||||||| |||||||| ||||||||  | ||||| 
Sbjct: 616 gcagatgatgcagttgatgaaaatggcaaggagtcagaagagctctctaagcggacaaaa 675

                                                                       
Query: 437 agaatgtcaattgaaattggacccagcagctttgcctctagaaagaagaaaactaagaag 496
           ||||||||||||||||||||||||||||||||||||||||  |||||||| |  ||||||
Sbjct: 676 agaatgtcaattgaaattggacccagcagctttgcctctaagaagaagaagagcaagaag 735

                
Query: 497 aactc 501
           |||||
Sbjct: 736 aactc 740



 Score =  168 bits (85), Expect = 2e-41
 Identities = 127/141 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcaaaattgatatgcaaactgactggggatactgtcaataagtctgaggaacacatatg 60
           ||||||| ||||||| || || |||||||||||||||||||||||||||||||| || ||
Sbjct: 234 ttcaaaactgatatgtaagctaactggggatactgtcaataagtctgaggaacatatttg 293

                                                                       
Query: 61  gaagcacatcaatggaaaaaggttccttaacaaattagaacaaaaagaaactgagaaagt 120
           ||||||||||||||| ||||| ||||||||||||||||||||||||||||  | ||||||
Sbjct: 294 gaagcacatcaatggcaaaagattccttaacaaattagaacaaaaagaaatggggaaagt 353

                                
Query: 121 tgaggggaagcaacaggaaga 141
           |||||  |||||| |||||||
Sbjct: 354 tgaggataagcaaaaggaaga 374