Jatropha Genome Database

JcCB0071361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0071361.10 + phase: 1 /partial
         (302 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m002028 uridine cytidine kinase I, putative                     113   6e-25

>29917.m002028 uridine cytidine kinase I, putative
          Length = 1389

 Score =  113 bits (57), Expect = 6e-25
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                        
Query: 152  gcaggcacctcaaggtattcatgcagtttgtaacaagtatccaaaggtaaagattgtaac 211
            ||||||||||||||| || ||||||||||||||  | |  |||||||| ||||| |||||
Sbjct: 1236 gcaggcacctcaaggcatacatgcagtttgtaagcaattcccaaaggtgaagatcgtaac 1295

                                                                        
Query: 212  atcagaaattgatgcgacattagacaatgattttcgtgtgatcccaggcatgggggtgtt 271
            |||||| || || |  ||| | |||||||||||| |||| |||||||||||||||| |||
Sbjct: 1296 atcagagatcgacgaaacactggacaatgatttttgtgtcatcccaggcatgggggagtt 1355

                                 
Query: 272  cggagatcgttactttggcac 292
             || |||||||||||||||||
Sbjct: 1356 tggggatcgttactttggcac 1376



 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                        
Query: 15   aaagccatatctctgctgctaagtaagggcgttccagaatctaacattatcttccttaac 74
            ||||| ||||||||||| || |||||||| ||||||||||||||||| || || ||||||
Sbjct: 1159 aaagctatatctctgcttctcagtaagggtgttccagaatctaacatcatttttcttaac 1218

                     
Query: 75   cttatagca 83
            |||||||||
Sbjct: 1219 cttatagca 1227