Jatropha Genome Database

JcCB0070971.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0070971.20 - phase: 2 /partial
         (250 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29584.m000244 Auxin-induced protein 5NG4, putative                     78   3e-14

>29584.m000244 Auxin-induced protein 5NG4, putative
          Length = 1107

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 144/179 (80%)
 Strand = Plus / Plus

                                                                        
Query: 35   tactttttctttggcgaagaactgcgaatgggaagcttgctgggaggagccgttattgtt 94
            |||||||| ||||| |||||||||||||  || |||||| | ||||||| | || || ||
Sbjct: 889  tactttttgtttggtgaagaactgcgaacaggcagcttggtcggaggaggcattgttatt 948

                                                                        
Query: 95   attggactgtacatattgttgttaggcaaagaaggagatggagaccagattaagtcaaaa 154
            || ||| ||||| || | || |||||||||||||| |||  ||| | || |||||| || 
Sbjct: 949  atcggattgtacctactattattaggcaaagaaggtgatcaagatcggactaagtccaac 1008

                                                                       
Query: 155  gatgaatcatttccagcttatgatgaggagaaggatcttcagacacagatggaaacttc 213
            ||  |||||||||||  | ||||| |||||||||| ||  ||| |||||||||||||||
Sbjct: 1009 gagcaatcatttccaattcatgatcaggagaaggacctgaagatacagatggaaacttc 1067