Jatropha Genome Database

JcCB0070851.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0070851.30 - phase: 0 /pseudo/partial
         (885 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008756 protein binding protein, putative                       204   7e-52

>30128.m008756 protein binding protein, putative
          Length = 1323

 Score =  204 bits (103), Expect = 7e-52
 Identities = 190/219 (86%)
 Strand = Plus / Plus

                                                                       
Query: 146 agaattggtggtttgaagatttttcatttcttcgaatagatcattttcttgaagtcattg 205
           ||||||||||||| || ||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 737 agaattggtggttcgacgatgtttcatttcttcgaatagatcaatttcttgaagtcattg 796

                                                                       
Query: 206 aatatattaaacgaaaagggatgagaacagaacttgttgggtcatgcatagaaaactgga 265
           ||| ||||||| |||||||||| ||| ||||||||||||| ||||||||||   ||||||
Sbjct: 797 aatgtattaaaagaaaagggataagatcagaacttgttggttcatgcatagctcactgga 856

                                                                       
Query: 266 caaagaaatgggtttctcaaattcctctcggacaactcattctgccaaaaaagcttacac 325
           |  | |||||| |||||||||||||| | || || | || |||||||||| | || ||||
Sbjct: 857 cggaaaaatggctttctcaaattccttttgggcagcacaatctgccaaaacatctaacac 916

                                                  
Query: 326 atcagttactgaaagttacagcagaaagtttgattaagg 364
           | || ||||||| |||||| |||||||||||||||||||
Sbjct: 917 accaattactgagagttactgcagaaagtttgattaagg 955



 Score =  101 bits (51), Expect = 7e-21
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                        
Query: 778  aaggagataaagatgatgaagaaagaggtcgaacatatgaaagtgcaactaaacgcattg 837
            |||||||| |||||||||||| ||||||| ||  | ||||| ||||| ||||| ||||||
Sbjct: 1213 aaggagattaagatgatgaagcaagaggttgagaacatgaaggtgcagctaaatgcattg 1272

                                                       
Query: 838  caaaaatgtaaaatgcaccttcagagacaagtgaagggatgca 880
            ||||  ||||||||||| |||||||||||||| ||||||||||
Sbjct: 1273 caaatgtgtaaaatgcagcttcagagacaagtaaagggatgca 1315