Jatropha Genome Database

JcCB0070851.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0070851.20 - phase: 0 
         (456 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008757 conserved hypothetical protein                          155   3e-37

>30128.m008757 conserved hypothetical protein
          Length = 576

 Score =  155 bits (78), Expect = 3e-37
 Identities = 162/190 (85%)
 Strand = Plus / Plus

                                                                       
Query: 30  ggacagccttaagatttcgccttcaagggaatttgaggattacattttgcagaacttgcc 89
           ||||||| | |||||||| |||||||||||||||||||||  ||||||||||||  |  |
Sbjct: 135 ggacagcttaaagatttctccttcaagggaatttgaggatatcattttgcagaatatatc 194

                                                                       
Query: 90  tgcagatagtcataaagctttgaactcatggcagcctgttgaagtatctattcatgatgt 149
           ||||| |||||||||||||||| |  | ||||||||| ||||| |||| ||| |||||||
Sbjct: 195 tgcagctagtcataaagctttggaaacttggcagcctattgaaatatcaatttatgatgt 254

                                                                       
Query: 150 tgataccgacgaaacttttaaggtaaacttggcaaagaaacagtctttttggtctgaacc 209
           ||||||  | ||||||| ||| ||| |||| ||||||||| |||| ||||||| ||||||
Sbjct: 255 tgatactcatgaaacttataaagtacacttagcaaagaaagagtccttttggtttgaacc 314

                     
Query: 210 attacctgat 219
           ||||||||||
Sbjct: 315 attacctgat 324



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 304 tttgcttactctcttcatccttttagacaaattatcaagaagaggaaacttagttatgat 363
           |||||||| |||||||| ||||||||||| ||| ||||||||||    ||||||||||||
Sbjct: 415 tttgcttattctcttcaaccttttagacacattgtcaagaagagaggccttagttatgat 474

                
Query: 364 caaga 368
           |||||
Sbjct: 475 caaga 479