Jatropha Genome Database

JcCB0070851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0070851.10 - phase: 0 /partial
         (386 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008758 protein binding protein, putative                       238   2e-62

>30128.m008758 protein binding protein, putative
          Length = 831

 Score =  238 bits (120), Expect = 2e-62
 Identities = 283/335 (84%), Gaps = 3/335 (0%)
 Strand = Plus / Plus

                                                                       
Query: 55  aatccatgccccatatgcctcggtcctttcattcaggaatcgtatctagattcttgtttc 114
           |||||||| ||||| || ||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 64  aatccatgtcccatctgtctcggtcctttcattcaggaatcctatcttgatacttgtttc 123

                                                                       
Query: 115 cataagttctgttacaactgcattttgcgttggactaaagt-agtcgctggcaa--gcat 171
           ||||| || ||||| || |||||||||| |||||||||||| | | |  || ||  ||||
Sbjct: 124 cataaattttgttataattgcattttgcattggactaaagttattggaaggaaaaggcat 183

                                                                       
Query: 172 tctcgtgcgccttcttctgtgaagtgtcctttgtgcaagacggaaaatctttcaataatc 231
           ||||   | ||||||||||| || ||||||||||||||||| ||||| | |||||| || 
Sbjct: 184 tctccctcaccttcttctgtaaaatgtcctttgtgcaagacagaaaaccattcaattata 243

                                                                       
Query: 232 tatgggtatgatggaagttcattccaaaggcattgtataaatgaaactcatgagcatagt 291
           ||||||| |||||||||||||||||||||||||| || ||||| || |    |  | |||
Sbjct: 244 tatgggtttgatggaagttcattccaaaggcattatacaaatgtaatttgccaaaacagt 303

                                                                       
Query: 292 tctttcttttcaaaagcacacaagtacagattacgatgctattatactgaaccaggtacc 351
           |||||||||||||||| ||||||||| ||||||| ||||||||||||| || ||||| | 
Sbjct: 304 tctttcttttcaaaagaacacaagtatagattacaatgctattatactaaatcaggttct 363

                                              
Query: 352 ttgagcaacatagttaatgtatcgcgatattggaa 386
           |||||||| ||||||||||||| |||||| |||||
Sbjct: 364 ttgagcaagatagttaatgtattgcgatactggaa 398