Jatropha Genome Database
- JcCB0069321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0069321.10 + phase: 2 /pseudo/partial
(1489 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29585.m000579 methionine-tRNA synthetase, putative 1110 0.0
>29585.m000579 methionine-tRNA synthetase, putative
Length = 1572
Score = 1110 bits (560), Expect = 0.0
Identities = 806/888 (90%)
Strand = Plus / Plus
Query: 141 cagctgaaacatttgtcctcacaactccgctttattacgtgaatgcccctcctcatatgg 200
|||| ||||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||
Sbjct: 230 cagcagaaacatttgtcctcactactcctctttattatgtgaacgcccctccccatatgg 289
Query: 201 gtagtgcctataccaccatcgctgctgatgccatagctcgatttcagagacttttaggga 260
|||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 290 gtagtgcctacaccaccatcgctgctgatgccattgcccgatttcagaggcttttaggaa 349
Query: 261 agaaagttatatttgttactggcactgatgagcatggagagaagattgctactgctgcag 320
|||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 350 agaaagttatatttgtcactggcacagatgagcatggagagaagattgctgctgctgcag 409
Query: 321 ctgcctgtggcgctagcccaagtgagcactgtgatgtcatatcacaagcttacaagacac 380
||||||||||| | ||||||||||||||||||||||||||||| |||| ||||| ||| |
Sbjct: 410 ctgcctgtggctccagcccaagtgagcactgtgatgtcatatctcaagattacaggactc 469
Query: 381 tttggaaagatttagaaattgcttatgacaaatttattcggacaactgatcccaagcatg 440
||||||||||||| |||||| |||||||||| || ||| ||||||||||||| |||||||
Sbjct: 470 tttggaaagatttggaaatttcttatgacaagttcattaggacaactgatccaaagcatg 529
Query: 441 aagcaattgtcaaggaattttattctagagttcttgccaatggggatatttatcgcgctg 500
|||||||||||||||||||||| ||||| || ||||| |||||||| |||||||| ||||
Sbjct: 530 aagcaattgtcaaggaattttactctagggtacttgctaatggggacatttatcgtgctg 589
Query: 501 actatgagggactatactgtgtcaactgtgaggagtataaggatgagaaggatctgcttg 560
|||| || || || ||||||||||||||||||||||||||||||| ||||| || || |
Sbjct: 590 actacgaaggtctctactgtgtcaactgtgaggagtataaggatgccaaggagctactag 649
Query: 561 ataacaagtgttgtcccgtgcacctaaagccatgcattcagcggaaagaggataattatt 620
||||||| ||||| ||| ||||||||||||| || ||| | || ||||||||||||||||
Sbjct: 650 ataacaactgttgccccatgcacctaaagccgtgtattgaacgaaaagaggataattatt 709
Query: 621 tctttgccttgtcaaagtaccaaaagctattagaagaaacattgacagagtgtccaaatt 680
||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||
Sbjct: 710 tctttgccttgtcaaagtaccaaaaactattagaagaaactttgacagagaacccaaatt 769
Query: 681 ttgtgcagccttcattccgtttgaatgaggtgcaaagctggattagaagtggcttgaaag 740
||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||
Sbjct: 770 ttgtgcagccttctttccgtttgaacgaggtgcaaagctggatcaaaagtggcttgaaag 829
Query: 741 atttttcaatttcccgagcatcagtggattggggcattccagttcctaatgacaataagc 800
||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 830 atttttccatttctcgagcatcagtggattggggcattccagttcctaatgataataagc 889
Query: 801 agaccatatatgtttggttcgatgcattactaggctacatatcagctctatcggaggaca 860
||||||| ||||| ||||| || || ||||| || || |||||||||||||| |||||||
Sbjct: 890 agaccatttatgtctggtttgacgctttactgggttatatatcagctctatcagaggaca 949
Query: 861 acaaacaacctaatttacaaagtgctgtttcttctggttggcctgcttcactacatttga 920
| | ||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 950 aggagcaacctaatttgcaaaatgctgtttcttctgggtggcctgcttcactacacttga 1009
Query: 921 ttgggaaggatattttacgtttccatgcagtttattggccagctatgctaatgtctgctg 980
|||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 1010 ttggcaaggatattttacgttttcatgcagtctattggccagctatgctaatgtctgctg 1069
Query: 981 gtctaggtcttcctaagatggtgtttggacatggattcttgacaaagg 1028
||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 1070 gtctaggccttcctaagatggtgtttgggcatggattcttgacaaagg 1117
Score = 151 bits (76), Expect = 1e-35
Identities = 142/162 (87%), Gaps = 4/162 (2%)
Strand = Plus / Plus
Query: 1324 ggttgaaaaggctcggattcattatgaaaatctctctttgtcattggcttgtgaggctgt 1383
|||||| || |||| |||||||||||||||||| | ||||| ||||||||||||||||
Sbjct: 1116 ggttgacaaagctcagattcattatgaaaatcttgcattgtcggtggcttgtgaggctgt 1175
Query: 1384 tcttgagattggtaatgctggaaatggctacatggatgaacgcactccatggtctctttt 1443
||| ||||||||||||||||| |||| ||||||||||||||| | |||||||||| |||
Sbjct: 1176 tctagagattggtaatgctgggaatgcctacatggatgaacgtgccccatggtctc-ttt 1234
Query: 1444 ttaagaaaggggggttggctgcttctgaagctgctgcaaagg 1485
||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1235 ttaagcaaggggg---tgctgcttctgaagctgctgcaaagg 1273