Jatropha Genome Database
- JcCB0069051.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0069051.20 - phase: 0 /pseudo
(1251 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008800 catalytic, putative 821 0.0
29848.m004538 Enoyl-CoA hydratase, mitochondrial precursor, puta... 72 9e-12
30101.m000373 catalytic, putative 58 1e-07
>30174.m008800 catalytic, putative
Length = 1248
Score = 821 bits (414), Expect = 0.0
Identities = 762/878 (86%)
Strand = Plus / Plus
Query: 372 agggagattggaagattgtaaggaattttttcggacactgtatactttcatatacatact 431
||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 357 agggaaattggaagattgtaaagaattttttaggacactgtatactttcatttacatact 416
Query: 432 aggtacttatttgaagccacatgtggctattttggatggaattaccatgggtggtggtgg 491
|||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 417 aggtacctatttgaagccacatgtggctattttggatggcattacaatgggtggtggagc 476
Query: 492 tggagtttcaatacctggaacattccgtgttgcaactgataaaactgtctttgctacccc 551
||| |||||||| || || || ||||| ||||||||||||||||||| |||||||||||
Sbjct: 477 tggggtttcaatccccggcactttccgcattgcaactgataaaactgtttttgctacccc 536
Query: 552 tgaaactcttattggattccatcctgatgctggtgcatctttctacctctctcatctacc 611
||||||||||||||| ||||| |||||||| |||||||| ||| | ||||| ||||||||
Sbjct: 537 tgaaactcttattgggttccaccctgatgccggtgcatccttccatctctcccatctacc 596
Query: 612 tggtcgcttaggggaatacttggctctaacttcagaaaccctcagtggagctgaaatggt 671
||||| ||||| |||||||||||||| ||| |||||| |||| ||||| |||||| |
Sbjct: 597 tggtcatttaggagaatacttggctctcactggagaaactctcaatggagtggaaatgat 656
Query: 672 tgcctgtggcctggctacccattattcatatagtgagaggcttcagttacttgagcaaca 731
||| ||||| || ||||| || |||||||||||||| |||||||| ||| |||| |||||
Sbjct: 657 tgcttgtggtctagctacacactattcatatagtgaaaggcttcaattaattgatcaaca 716
Query: 732 gcttggggaactggtcactgatgatccttctgttattgaagctcatttagaaaagtacag 791
||||||| | || || || |||||||||||||| |||||||| ||||||||| || |
Sbjct: 717 gcttgggcagcttgttaccgatgatccttctgtcattgaagcaactttagaaaaatatgg 776
Query: 792 cgaccttgtccatccagataagatgagtgtaattcacaggattgaaactgtcgataaatg 851
|||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||
Sbjct: 777 tgaccttgtccatccagataagatgagtgcacttcacaggattgaaactgttgatagatg 836
Query: 852 tttcagccatgacacagttgaagaaatatttgatgctctggaaagtgaggcttctggtac 911
|||| || ||||||| ||||||||||| ||||| ||| ||||||||||||||||||| ||
Sbjct: 837 tttcggctatgacactgttgaagaaatttttgaagctttggaaagtgaggcttctggaac 896
Query: 912 taaagatgcattttgcaattccactctaagaagactcaaggaagcatcaccattaagctt 971
|| ||||||||||||||||||||| |||||||||| || |||||||||||||| |||||
Sbjct: 897 caacgatgcattttgcaattccactttaagaagacttaaagaagcatcaccattgagctt 956
Query: 972 gaaggtttccttaagatctatacgtgaaggtagatttcaaacactcgaccagtgcttggt 1031
|||||||||| ||||||||||||| |||||||||||||||||||| || || || ||||
Sbjct: 957 gaaggtttccctaagatctatacgagaaggtagatttcaaacacttgatcaatgtctggt 1016
Query: 1032 ccgtgaatatcgaatgtccttgcagggaacatccaagcttatatctagtgacttttgtga 1091
||||||||| |||||||| || ||||||| ||| |||| || |||| |||||||| |||
Sbjct: 1017 ccgtgaataccgaatgtctttacagggaatatctaagcagatttctaatgacttttatga 1076
Query: 1092 gggtgttcgtgcacggatggtcgataaggacttagcaccgaagtggaatcctccaagctt 1151
||||||||||||||| ||||| || | |||||| ||||| |||||||| || || |||||
Sbjct: 1077 gggtgttcgtgcacgaatggtggacagggacttggcaccaaagtggaacccacctagctt 1136
Query: 1152 ggaagaagtgtcggaagatatggtggaacattatttttctcctctcagtgcagtggagcc 1211
|||| ||||||| ||||| ||||||||||||||||| || | || |||| | |||||||
Sbjct: 1137 ggaaaaagtgtcagaagacatggtggaacattatttctcccggcttagtgaaatggagcc 1196
Query: 1212 tgatctaaagcttcccacaggagagagagaagcgttca 1249
||||||| | |||||||||| | || ||||||| ||||
Sbjct: 1197 tgatctagatcttcccacagaacagcgagaagcattca 1234
Score = 246 bits (124), Expect = 3e-64
Identities = 187/208 (89%)
Strand = Plus / Plus
Query: 120 atctcgagaaccaggtattagtcgaaggtaaagcttattccagaaccgccattctcaata 179
||||||| || || |||||||| ||| ||||||||||||| || ||||| ||||||||||
Sbjct: 131 atctcgacaaacaagtattagttgaaagtaaagcttattcaaggaccgctattctcaata 190
Query: 180 gaccttctgctctcaatgctcttaatactaatatgggtgctagattgctaaaattgtata 239
||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 191 gaccttctgctcttaatgctctcaatactaatatgggtgcaagattgctaaaattgtaca 250
Query: 240 catcttgggaggataatccggatattggttttgtggcgatgaagggtagtggcagggcat 299
|| |||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||
Sbjct: 251 agtcatgggaggaaaatccggatgttggttttgtgatgatgaagggcagtggcagggcat 310
Query: 300 tttgtgcaggtggagacattgttgctct 327
||||||||||||||||||||||| ||||
Sbjct: 311 tttgtgcaggtggagacattgttactct 338
>29848.m004538 Enoyl-CoA hydratase, mitochondrial precursor,
putative
Length = 1221
Score = 71.9 bits (36), Expect = 9e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 796 cttgtccatccagataagatgagtgtaattcacaggattgaaactgtcgataaatgtttc 855
|||||| |||||||||||| ||||| |||||| |||||| || | ||||||||||||
Sbjct: 763 cttgtctatccagataagacaagtgtccttcacaagattgagaccattgataaatgtttc 822
Query: 856 agccatgacacagttgaagaaatatttgatgc 887
|||||||| ||||| || |||||| |||||||
Sbjct: 823 agccatgatacagtagaggaaataattgatgc 854
>30101.m000373 catalytic, putative
Length = 1212
Score = 58.0 bits (29), Expect = 1e-07
Identities = 134/169 (79%)
Strand = Plus / Plus
Query: 848 aatgtttcagccatgacacagttgaagaaatatttgatgctctggaaagtgaggcttctg 907
||||||| ||||||||||||| |||||||| || |||||||||||| |||||| | |
Sbjct: 806 aatgttttggccatgacacagtggaagaaattcttcatgctctggaaactgaggcagcag 865
Query: 908 gtactaaagatgcattttgcaattccactctaagaagactcaaggaagcatcaccattaa 967
|| ||||||| | |||| ||| || || | ||||||| ||||| |||| || |
Sbjct: 866 ctataaaagatgagtggtgcatttcaacactcaagagactcagagaagctccacccttga 925
Query: 968 gcttgaaggtttccttaagatctatacgtgaaggtagatttcaaacact 1016
||||||| ||||||||||||||||| | ||||| |||||||| |||||
Sbjct: 926 gcttgaaaatttccttaagatctataagagaaggcagatttcagacact 974
Score = 56.0 bits (28), Expect = 5e-07
Identities = 166/212 (78%)
Strand = Plus / Plus
Query: 376 agattggaagattgtaaggaattttttcggacactgtatactttcatatacatactaggt 435
||||||||||| ||||| || | ||| ||||| | |||| ||||| ||| | |||||
Sbjct: 331 agattggaagaatgtaaagattgctttaggacattttatagcttcatgtacctgctagga 390
Query: 436 acttatttgaagccacatgtggctattttggatggaattaccatgggtggtggtggtgga 495
|| |||||||| |||||||||||||| ||||| || ||||| ||||| || |||| |||
Sbjct: 391 acatatttgaaaccacatgtggctatattggacggcattacaatgggaggaggtgctggg 450
Query: 496 gtttcaatacctggaacattccgtgttgcaactgataaaactgtctttgctacccctgaa 555
||||| | | ||| || | | || |||||||| |||||||| |||| | ||||||
Sbjct: 451 ctttcagtccatggttcacacagagtagcaactgaaaaaactgtttttggtgttcctgaa 510
Query: 556 actcttattggattccatcctgatgctggtgc 587
| |||||| || || ||||||||||| |||||
Sbjct: 511 attcttatcggcttgcatcctgatgcaggtgc 542