Jatropha Genome Database
- JcCB0068881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0068881.10 + phase: 1 /partial
(1568 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative 1122 0.0
28515.m000319 Ubiquitin carboxyl-terminal hydrolase, putative 80 5e-14
>30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2817
Score = 1122 bits (566), Expect = 0.0
Identities = 1315/1563 (84%), Gaps = 10/1563 (0%)
Strand = Plus / Plus
Query: 1 gaacttcttgcctttt-actggatgggcttcatgaagatctgaatcgtgtcaagcagaaa 59
||||||||||| |||| |||||||||||| ||||||||| |||| ||||||||||||||
Sbjct: 1255 gaacttcttgcatttttactggatgggctgcatgaagatttgaaccgtgtcaagcagaag 1314
Query: 60 ccttacattgaaatgaaagattgggatggtcgtccagatgaggaggttgcagacgagtgt 119
||||||||||| ||||| ||||||| ||||||||| ||||| ||||||||||| ||||||
Sbjct: 1315 ccttacattgagatgaaggattggggtggtcgtccggatgaagaggttgcagatgagtgt 1374
Query: 120 tggagaaatcacaaggctcgaaatgattctgtaattgtggatgtttgccagggtcaatat 179
|||||||||||||||||| | |||||||| || |||||||| |||||||| |||||||||
Sbjct: 1375 tggagaaatcacaaggctaggaatgattcagtcattgtggacgtttgccaaggtcaatat 1434
Query: 180 aagtcgacactggtctgcccagtttgcagcaaaatttcaattacttttgacccctttatg 239
|| ||||| ||||| ||||| ||||||||||| |||||||||||||| || || ||||||
Sbjct: 1435 aaatcgacgctggtttgccctgtttgcagcaagatttcaattactttcgatccgtttatg 1494
Query: 240 tatttgtcactgccgctaccttccactgtcactcgttcaatgacagtaacagtgttttat 299
|| |||||| |||| |||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 1495 tacttgtcattgccactaccttcaactgtcactcgttctatgacaataacagtgttttat 1554
Query: 300 ggagatggaagtggtcttccaatgccatatactgtctctgtactaaaaaatggtcattgt 359
|| |||||||||| ||||||||||||||| ||||| || || || |||||||||||||||
Sbjct: 1555 ggtgatggaagtgctcttccaatgccatacactgtgtcagtgcttaaaaatggtcattgt 1614
Query: 360 agagatcttattcaggcattggttgctgcgtgttgcttgagaagtgatgaaagtcttctg 419
|||||||||| ||||||| ||| |||||| || || ||| ||||||| ||||| ||||||
Sbjct: 1615 agagatcttactcaggcactggctgctgcatgctgtttgggaagtgaggaaagccttctg 1674
Query: 420 cttgcagaagtctatgatcacaggatttatcgtctatttgaaaatccttttgaatcattg 479
|| || |||||||||||||| ||||||||||||||||||||||| |||| ||| |||||
Sbjct: 1675 ctagcggaagtctatgatcataggatttatcgtctatttgaaaacccttatgagtcatta 1734
Query: 480 acttctataaaagatgaagaatatattgttgcataccggctttctcagaagggaatagga 539
|||||||| |||||||||||||| || || || || |||||||||| | | |||
Sbjct: 1735 gtctctataaaggatgaagaatatatcgtggcctatcgcctttctcagagagatacggga 1794
Query: 540 aaaaggaaactggaaattgttcaccaggaaaggtctgcaccagactttgtgaaaggcagt 599
|||| |||| | ||||| || | ||||||| ||| ||| || | | | |||||||
Sbjct: 1795 aaaaagaaattagaaatcattaatcaggaaaagtcagcattgga---tctaagaggcagt 1851
Query: 600 ggattcaaagattttggagcacctctggttacttacttggacgatgacccgccaagtgga 659
|| | || ||||||||||||||||| |||||| ||| | |||||| | |||||||||
Sbjct: 1852 gggtggaaggattttggagcacctcttcttacttgtttgcaagatgactcaccaagtgga 1911
Query: 660 gctgatattgagttggcggcttctagacttctctcacccttgattagaacatgctcatct 719
|||||||| |||||||| | ||||||||| ||||||||||||| || ||||| ||||||
Sbjct: 1912 gctgatatagagttggctgtttctagactgctctcacccttgagaaggacatgttcatct 1971
Query: 720 aatgcag------ttcattgtggaaaggaaaatggttttctttcagaatctaatggtgaa 773
| || | ||||| |||| |||||||||||||||||| ||| |||||| |
Sbjct: 1972 agtgtggctcacattcatagtggcaaggaaaatggttttcttctggaagctaatgacaga 2031
Query: 774 acatcaaattgctgcaacggtcatgctgaattaggagaccggtcaatggacactatggaa 833
|||||||| ||||||| ||| ||||| | ||| | | | ||||| | | | |||
Sbjct: 2032 ccatcaaatagctgcaatggttcacctgaacaggaagatcagcctatggagaatgtagaa 2091
Query: 834 ctagaggacacatctggccaagagttatcattccagctctttctaacagatgatcggtat 893
| |||||||||||| ||| ||||||||||| | ||||||| |||| ||||||||||
Sbjct: 2092 ccagaggacacatccaaccaggagttatcatttcggctctttttaactgatgatcggtgc 2151
Query: 894 tcaagtcgcaaaccgatattcaaggattctgtcatcaaaactggagcaaatcatataaag 953
|||| | ||| || || || | ||||||||| || ||| |||||| || || ||| |||
Sbjct: 2152 tcaacccacaagccaattttgagggattctgtaataaaatctggaggaagtcgtatgaag 2211
Query: 954 gttttcctagagtggactgaaaatgaacacaagttatatgatcctagctatatgaaggat 1013
||||| |||||||||||||||| |||||||| |||||||||| ||||| | || |||
Sbjct: 2212 gtttttctagagtggactgaaatggaacacaaaacatatgatccttgctatcttaaagat 2271
Query: 1014 ctcccagttgtttatcataaaactgggtttactgcgaagaagacccggcaggaaggtgtc 1073
|||||||| |||||||| || |||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 2272 ctcccagtggtttatcacaagactgggtttactgcaaagaaaacccggcaggaagctgtc 2331
Query: 1074 tctttattttcatgtttggaggcattcttgaccgaagaaccgctggggcctgatgacatg 1133
|| || |||||||| |||||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 2332 tcattgttttcatgcctggaggcattcttgactgaagaacctctagggcctgatgatatg 2391
Query: 1134 tggtactgccctggttgcaaacaacatagacaagccaccaagaaactagatttgtggaca 1193
||||| || |||||||| ||| ||||||||||||| |||||||| |||||| | ||||||
Sbjct: 2392 tggtattgtcctggttgtaaagaacatagacaagctaccaagaagctagatctatggaca 2451
Query: 1194 ttgcctgagattcttgtttttcacttgaaacggttctcatacagcagatacctgaagaac 1253
|||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 2452 ttgcctgaaattcttgttttccacttaaaacggttctcatacagcagatatctgaaaaat 2511
Query: 1254 aaacttgatacttttgtggatttccctattcataatcttgatttgagcaaatttgtgaag 1313
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 2512 aaactggatacttttgtagatttccccattcacaatcttgatttgagcaaatttgttaaa 2571
Query: 1314 cggaaagatgggaaatcatatgtatatgaactctatgccatcagcaaccattacggtggt 1373
||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 2572 aggaaagatgatcgatcatatgtatatgaactatatgccatcagcaaccattatggtggt 2631
Query: 1374 ctaggtggtgggcactatacagcttttgcgaagttgatcgatgataaaagatggtacaat 1433
|||| || ||||||||||| |||||||| |||||||| ||||| | ||||||||||||
Sbjct: 2632 ttaggcggcgggcactataccgcttttgctaagttgatggatgagagtagatggtacaat 2691
Query: 1434 tttgacgacagccgagtttctccagttaacgaggctgatatcaagacttcagctgcttat 1493
||||| |||||||| |||||||| || || |||||||||||||||||||||||||| |||
Sbjct: 2692 tttgatgacagccgggtttctccggtcaatgaggctgatatcaagacttcagctgcctat 2751
Query: 1494 gtgttgttctaccaaagagttgaaacagcaacaaaggtgggattgggagagacatcacag 1553
||| | ||||||| |||||||| ||| | |||||||| |||||||||||||| || |||
Sbjct: 2752 gtgctcttctaccgaagagttggaactgaaacaaaggcaggattgggagagacgtcgcag 2811
Query: 1554 ggt 1556
|||
Sbjct: 2812 ggt 2814
>28515.m000319 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2829
Score = 79.8 bits (40), Expect = 5e-14
Identities = 154/192 (80%)
Strand = Plus / Plus
Query: 21 gatgggcttcatgaagatctgaatcgtgtcaagcagaaaccttacattgaaatgaaagat 80
||||| ||||||||||| |||||||||||||| || ||||||||||| | ||||||
Sbjct: 1261 gatggccttcatgaagacctgaatcgtgtcaaacataaaccttacataaagtctaaagat 1320
Query: 81 tgggatggtcgtccagatgaggaggttgcagacgagtgttggagaaatcacaaggctcga 140
||||||||||| ||||| || ||||| || |||| ||| |||||||| |||||
Sbjct: 1321 gctgatggtcgtcctgatgaagaagttgctgatgagtactgggcaaatcacattgctcgt 1380
Query: 141 aatgattctgtaattgtggatgtttgccagggtcaatataagtcgacactggtctgccca 200
|||||||| |||| || || |||||||| |||||||| ||||| || |||| ||||||
Sbjct: 1381 aatgattcaataatagttgacgtttgccaaggtcaatacaagtcaactttggtttgccca 1440
Query: 201 gtttgcagcaaa 212
|| |||| ||||
Sbjct: 1441 gtgtgcaacaaa 1452