Jatropha Genome Database

JcCB0068571.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0068571.20 - phase: 0 
         (240 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006987 Light-regulated protein precursor, putative             115   1e-25

>30131.m006987 Light-regulated protein precursor, putative
          Length = 423

 Score =  115 bits (58), Expect = 1e-25
 Identities = 194/241 (80%), Gaps = 15/241 (6%)
 Strand = Plus / Plus

                                                                       
Query: 9   tgtgtttccagcagaggcatgtgaaactatcggtggagaagcctgtttggcagacatata 68
           |||||||||||||||||| ||||||||  | |||||||| || ||||||||| |||||| 
Sbjct: 189 tgtgtttccagcagaggcttgtgaaaccctaggtggagatgcatgtttggcaaacatatt 248

                                                                       
Query: 69  tcctgaagtaaagctggaaagggaggccagaaatgaagctg---------gaattgcctc 119
           ||||||||||||||| ||      ||| ||||| || || |         ||||||| ||
Sbjct: 249 tcctgaagtaaagcttga------ggctagaaacgacgcagcagccgctagaattgcttc 302

                                                                       
Query: 120 agagcctattgaaagagagtatcttgactacaatgacgccaagacggtttttgttggaga 179
           |||||| |||||||||||||||||||| |||||||| || |||||||||||    | |||
Sbjct: 303 agagcccattgaaagagagtatcttgaatacaatgatgcaaagacggttttctgcgcaga 362

                                                                       
Query: 180 ggcttgtgatgatcttgggggagaattctgtggatttgagtatcagaaaggtgtctacta 239
           ||||||||||||||| || |||||||||||| |   ||||||||||| ||| || |||||
Sbjct: 363 ggcttgtgatgatctcggaggagaattctgtagccgtgagtatcagagaggagtgtacta 422

            
Query: 240 g 240
           |
Sbjct: 423 g 423