Jatropha Genome Database
- JcCB0067131.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0067131.20 + phase: 0 /partial
(883 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004502 endo-1,4-beta-glucanase, putative 743 0.0
30147.m014207 endo-1,4-beta-glucanase, putative 76 4e-13
30131.m007125 endo-1,4-beta-glucanase, putative 56 4e-07
>29929.m004502 endo-1,4-beta-glucanase, putative
Length = 1875
Score = 743 bits (375), Expect = 0.0
Identities = 743/869 (85%), Gaps = 3/869 (0%)
Strand = Plus / Plus
Query: 1 atgcattctgggaataactggggaggatctttcgagataatcaatggagcagaatcaaca 60
|||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 1 atgcattccgggaacaactggggaggatcattcgagataatgaatggagcagagtcaact 60
Query: 61 acagaagacgagagaagccggaacatggaatgggacagaggggcccttcaatctcaacag 120
| || ||| |||| ||| ||||||| ||||||||||| || ||| | || || |||||
Sbjct: 61 gcggaggaccagaggagcaggaacatcgaatgggacaggggagccttgcactcccaacaa 120
Query: 121 caacgctaccataat---aatctcgacgaaacacaacagagttggttattgtacccacaa 177
|| | |||||| ||||| ||||| ||||| ||||| |||||| | || || |||
Sbjct: 121 cattatcatcataatcataatctggacgagacacagcagagctggttactctatcctcaa 180
Query: 178 gaaaccnnnnnnnnnnnntatgtggacttcggctgtatagtttgcagccgcaaggccttg 237
|||||| ||| | ||||| ||||| ||||||||||| | ||||||||
Sbjct: 181 gaaaccaagaagaagaagtatatcgactttggctgcatagtttgcagtcataaggccttc 240
Query: 238 aagtggacggtttattccattcttattgcgtttctagtgattgcgctgcctaccatcatt 297
|||||||| | |||||||| || ||||| || || |||||||| || || |||||| |
Sbjct: 241 aagtggactctctattccatactcattgcattcctggtgattgcactccccaccatcgtc 300
Query: 298 gccaagactttgcccaagcacaagtcccatccccctcctcctgacaattacactcttgcg 357
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 301 gccaagactttgcccaagcacaagtcttctcctcctcctcctgacaattacactcttgcc 360
Query: 358 ctccacaaggccctcctctttttcaatgcccagagatctggaaaattgcccaagaataat 417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 ctccacaaggccctcctctttttcaatgcccagagatctggtaaattgcccaagaataat 420
Query: 418 gggataccatggagaggggattcagggcttcaggatggaaacgatacagattacaaggga 477
|| ||||| |||||||||||||||||||| || || |||||||||||||||| |||| |
Sbjct: 421 ggcataccctggagaggggattcagggctgcaagacggaaacgatacagattttaaggca 480
Query: 478 gggcttgtaggtggatactatgatgctggagacaatgtcaagttcaactttccaatgtca 537
||||||| || ||||| |||||||||||||||||| |||||||| | ||||| ||| ||
Sbjct: 481 gggcttgatggaggatattatgatgctggagacaatatcaagttccattttcctatggca 540
Query: 538 tttactatgacaatgttgagctggagtctcatagaatataatcacaaatatcatgccatt 597
| ||| |||||||||||||||||||||||||| ||||| |||||||||||| | || |||
Sbjct: 541 tataccatgacaatgttgagctggagtctcatcgaatacaatcacaaatataaggcgatt 600
Query: 598 ggtgagtatgaccatatgcgagatctcatcaagtggggtactgattacttgctcttgaca 657
|| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcgaatataaccatatgcgagatctcatcaagtggggtactgattacttgctcttgaca 660
Query: 658 tttaactccactgctaccagaattgacaaaatttactgtcaggttggtggatctctaaat 717
|| ||||| || || || ||||||||||||||||| | |||||||||||||||||||||
Sbjct: 661 ttcaactctaccgccactagaattgacaaaatttattcccaggttggtggatctctaaat 720
Query: 718 ggttctacgacacccgatgatcattactgctgggagagaccagaagacatggactacagg 777
|||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 721 ggttctacaacaccagatgatcattactgctgggaaagaccagaagatatggattatagc 780
Query: 778 cgaccttccatatccgttacagccggcccagaccttgcaggggaaatggcagcagcctta 837
|||||||||||| ||||||| | ||||| ||||||||||| |||||||| |||||||||
Sbjct: 781 cgaccttccatacccgttaccacaggccccgaccttgcaggagaaatggcggcagcctta 840
Query: 838 gcagccgcctcaatagtgttccgagacaa 866
||||| |||||||||||||||||||||||
Sbjct: 841 gcagcagcctcaatagtgttccgagacaa 869
>30147.m014207 endo-1,4-beta-glucanase, putative
Length = 1512
Score = 75.8 bits (38), Expect = 4e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 487 ggtggatactatgatgctggagacaatgtcaagttcaactttccaatgtcattt 540
|||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||
Sbjct: 220 ggtggatactatgatgctggtgacaatgtcaaattcaattttccaatggcattt 273
>30131.m007125 endo-1,4-beta-glucanase, putative
Length = 1299
Score = 56.0 bits (28), Expect = 4e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 487 ggtggatactatgatgctggagacaatgtcaagttcaactttccaatgtcatttactatg 546
||||| |||||||||||||| || |||||||||||| || |||||| |||||||||
Sbjct: 211 ggtggctactatgatgctggtgataatgtcaagttcgggttcccaatggcatttactact 270
Query: 547 acaatgtt 554
||||||||
Sbjct: 271 acaatgtt 278